| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2260 |
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| Symbol | |
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| ID | 3905028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2638580 |
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| End bp | 2641237 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637879591 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_481357 |
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| Protein GI | 86740957 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00837381 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACTCA CCGACCACCT TCCCCCGACT TCCGGCACCG GCCATGACGG CGAACGGGCC
GCCCACCCGA AGGACCCCCA CCCGAAGGAC CCCGACTCGA AGAACCCGGA CCTGACCGGC
CCCGACGACG GGCCCGGCGG CGGGCCCGAT CCCGACGCAC TCTATGACGC GTTCACCAGG
TGGGTCGCAG AGCAGGGGCT GGAGCTGTAC CCGGCGCAGT CCGAGGCGCT GATCGAGATC
GTCTCGGGGT CGAACGTGAT CCTGGCGACG CCGACCGGGT CGGGCAAGAG CCTGGTCGCG
GCGGGGGCGC ACTTCGCGGC GCTGGCGGCG CGGCGGCGTA CCTTCTACAC CGCGCCGATC
AAGGCGCTGG TGTCGGAGAA GTTCTTCGCG TTGTGCGCGA TGTTCGGCGC GGCGCAGGTC
GGGATGATGA CCGGGGACGC CAGCGTGAAC GACACGGCGC CGATCATCTG CTGCACGGCG
GAGGTACTGG CGAACATCGC GCTGCGCGAC GGGGTCGCCG CCGACGTCGG TCAGGTCGTC
ATGGACGAGT TCCACTACTA CGCCGACCCC GACCGCGGCT GGGCCTGGCA GGTGCCGCTG
CTGGAACTGC CGCACACCCA GTTCATCCTG ATGTCGGCGA CGCTCGGTGA CGTGTCGCTG
TTCGAGGCGG ACCTGACGCG GCGCACCGGG CGCGAGACCA CGGTGGTGCG CTCCGCGCAG
CGTCCGGTGC CGCTGTTCTA CCGGTTCGTC ACCACGCCGA TGCACGAGAC GATCGGTGAG
CTGCTGGAGA CCCACCAGGC TCCCGTCTAC GTCGTGCACT TCACCCAGGC GCAGGCGTTG
GAACGGGCGC AGGCGCTGAT GAGCGTGAAC GTGTCGACCC GGGCGGAGAA GGACGCGATC
GCGAGGACGA TCGGGAACTT CCGGTTCACC GCCGGGTTCG GCAAGGTGCT GTCCCGGCTG
GTCCGCCACG GCATCGGGGT GCATCACGCC GGAATGCTGC CGAAGTACCG CCGGCTGGTG
GAGCAGCTCG CCCAGGCGGG GCTACTGAAA GTCATCTGCG GCACGGACAC CCTGGGGGTG
GGGATCAATG TGCCGATCCG CACGGTGGTG TTCACCTCCC TGTCGAAGTA CGACGGGAGC
AGGGTGCGGC TGCTGTCGGC ACGGGAGTTC CATCAGATCG CCGGGCGGGC CGGGCGGGCC
GGCTACGACC CGGTCGGCAA CGTCGTCGTG CAGGCCCCCG AGCATGTGAT CGAAAACGAA
CGCGCGTTGG CGAAGGCCGG GGACGATCCG AAGAAGCGGC GCAAGGTGGT CCGCAAGAAG
CCCCCCGAGG GCAGCGTCGG GTACGGCCTG GCGACGTTCG AACGGCTCAT CGCGGCCGAA
CCCGAGCCGT TGACCTCCCA GTTCACCGTG AACCACGCGA TGCTGCTCAA CGTGATCAAC
CGGCCGGGGG ACGCGTTCGC GTCGATGCGC CACCTGCTCA CCGACAACCA TTCGGATCGC
GCCACTCAGC GCCGGCTGAT CCACCGGGCG ATCGCGATCT ACCGGGCGCT GCTGGCGGCC
GGGGTGGTGG AGCGCCTCGA CACCCCCGAC GAGCTTGGCC GCGGCGTGCG GGTGACGGTG
GACCTGCAGC TCGACTTCGC GCTCAATCAG CCGCTGTCCC CGTTCGCGCT GGCCGCGCTG
GAGCTGCTCG ACCCGGCCTC CCCCTCCTAT GCGCTGGATG TGCTTTCGGT GCTGGAGGCG
ACCCTGGACA ATCCCCGGCA GGTGCTGCAC GCCCAGCTGT CGAAGGCGAA GGGGGAGGCG
GTCGCGGCGA TGAAGGCCGA GGGCGTCGAC TACGACCGGC GGATGGAGCT GCTGGAGGAG
GTCAGCTATC CCCAGCCGCT GGCGGAGCTG CTGGGCGCGG CGTTCGGCCT GTACCGGCGG
GGGCATCCCT GGGTCGACGA CTACGAGCTG GCGCCGAAGT CGGTGGCGCG GGAGCTCTAC
GAGCGGGCGA TGACGTTCGC CGAGTACGTG GCGTTCTACG GGCTGGCCCG CTCCGAGGGG
CTGCTGCTGC GCTACCTGGC CGACGCCTAC AAGGCGCTGC GCCAGACGGT GCCCGAGGAC
GCCCGCACCG AGGAGGTCGT CGACCTGACC GAGTGGCTGG GGGAACTGGT CCGCCAGACC
GACTCCAGCC TCCTCGACGA GTGGGAGCGG CTGAGCAACC CGGCCGGGGA CGGCGCGGGC
GCCACGGCGG GCACCACGGC GAGCGGTGGT GGCGTCGACG AGCGGCCACC GGCGGTCACG
GGCAACATCC GGGCATTTCG GGTGTTGGTG CGCAACGCGC TGTTCCGCCG GGTCGAGCTT
GCCGCGCTGC GCCGCTACGA CACGCTCGGC GAGCTCGACG GCGGGTATGA CGGCGGGTTC
GACGCCGACG GGTGGCGGGC GGCGTTGGAG CCGTACTTCG CCGAGCATGG CGAGATCGGC
ACCGGTCCGG ACGCGCGGGG GCCGGGTCTG CTCATCCTCG ACGAGAAGCC GGGGACGCCG
GGGACGTGGA CGGCGCGACA GATCTTCGAC GACCCGGCCG GGGACCATGA CTGGGGCTTC
AGCGCGGAGA TCGACCTGAC CGCCTCGGAC GAGGCGGGGG TCGCGGTGGT CCGGGTCACC
GCCGTCGACC GATTCTGA
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| Protein sequence | MTLTDHLPPT SGTGHDGERA AHPKDPHPKD PDSKNPDLTG PDDGPGGGPD PDALYDAFTR
WVAEQGLELY PAQSEALIEI VSGSNVILAT PTGSGKSLVA AGAHFAALAA RRRTFYTAPI
KALVSEKFFA LCAMFGAAQV GMMTGDASVN DTAPIICCTA EVLANIALRD GVAADVGQVV
MDEFHYYADP DRGWAWQVPL LELPHTQFIL MSATLGDVSL FEADLTRRTG RETTVVRSAQ
RPVPLFYRFV TTPMHETIGE LLETHQAPVY VVHFTQAQAL ERAQALMSVN VSTRAEKDAI
ARTIGNFRFT AGFGKVLSRL VRHGIGVHHA GMLPKYRRLV EQLAQAGLLK VICGTDTLGV
GINVPIRTVV FTSLSKYDGS RVRLLSAREF HQIAGRAGRA GYDPVGNVVV QAPEHVIENE
RALAKAGDDP KKRRKVVRKK PPEGSVGYGL ATFERLIAAE PEPLTSQFTV NHAMLLNVIN
RPGDAFASMR HLLTDNHSDR ATQRRLIHRA IAIYRALLAA GVVERLDTPD ELGRGVRVTV
DLQLDFALNQ PLSPFALAAL ELLDPASPSY ALDVLSVLEA TLDNPRQVLH AQLSKAKGEA
VAAMKAEGVD YDRRMELLEE VSYPQPLAEL LGAAFGLYRR GHPWVDDYEL APKSVARELY
ERAMTFAEYV AFYGLARSEG LLLRYLADAY KALRQTVPED ARTEEVVDLT EWLGELVRQT
DSSLLDEWER LSNPAGDGAG ATAGTTASGG GVDERPPAVT GNIRAFRVLV RNALFRRVEL
AALRRYDTLG ELDGGYDGGF DADGWRAALE PYFAEHGEIG TGPDARGPGL LILDEKPGTP
GTWTARQIFD DPAGDHDWGF SAEIDLTASD EAGVAVVRVT AVDRF
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