| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2256 |
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| Symbol | |
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| ID | 3905024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2633920 |
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| End bp | 2634615 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637879587 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_481353 |
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| Protein GI | 86740953 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00707302 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00176576 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGGGAGA CCGCGCCCCC AGGGGAGGCC GCGCCCCGGG CCGCCGGCGT GGTGCCGTGG
GCGATCTGGT GCGATTTCGG CGGAGTGCTG ACGTCGTCGA TCGCTGTGGC GTTCCGCGAC
CTGGTCGCCG CCGTGGGCGT ACCCGCCCAC GAGCTGCGCC GGGCGTTCGA CCAGGTGGCG
GCGACGTGGG GCCTGCGCAC GTTGGGCCCC CTCGAACGGG GCGTGGTCAG CCAGCACGAC
TGGGGGATCC TCGTCACGGA CGCCCTCGGG CCAGCCCACC CGCCGCGCAT TGACCTGTCC
CGGTTCGGGG ACCATTGGTA TGCCGGTCGT ACCCTGGAGT CGGTGATGGT CGACGGGCTG
CTGCGCGCCC GCGCCGCCGG CCTGCGGGTG GGACTGCTGA CCAACAGCGT GGCCGAGTGG
GAGCCGCTGC GCCGCGCGCT GCTGCCCGAC TGGTCGGTCT TCGAGTCAAT CATCAACTCC
CATGAGATCG GGATCGGCAA GCCCGACCCG GCCATCTACG ACCTCGCCGA ACGCACGTTC
GGCCAGCCCG GCCCGGGCTG CGTCCTCATC GACGACGCCG CCGCGAACTG TGAGGCAGCG
CGCCGGCGCG GCTGGACGGC GATCCATCAC CGCAGCGTCG CGGACACGCT GGCCGAGCTG
GCCGCGGTGA CCGGGGTTCC CGAGCTGGCC GGCTAG
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| Protein sequence | MGETAPPGEA APRAAGVVPW AIWCDFGGVL TSSIAVAFRD LVAAVGVPAH ELRRAFDQVA
ATWGLRTLGP LERGVVSQHD WGILVTDALG PAHPPRIDLS RFGDHWYAGR TLESVMVDGL
LRARAAGLRV GLLTNSVAEW EPLRRALLPD WSVFESIINS HEIGIGKPDP AIYDLAERTF
GQPGPGCVLI DDAAANCEAA RRRGWTAIHH RSVADTLAEL AAVTGVPELA G
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