| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2254 |
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| Symbol | |
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| ID | 3905022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2631709 |
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| End bp | 2632536 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879585 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_481351 |
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| Protein GI | 86740951 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000539502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00573308 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCGCGCT CTGATGTCCA GGCCACCCGC GCCGCCGGCC GGCACGTGGT ACTCGCCGTG
GCGGTCGTCG CGATGCTCTT CCCGATGCTG TGGGCGCTGA CCACCTCGTT CAAGCCGCCC
GCGGACATCT ACGGCGCCAA CCCGCTGCCC ATCCCGGCCA GCCTGAGCAA CTACCGCAAC
GCCATCGACG GGTTCCCCAT CGGCCGACTG CTGCTGAACA CCTTCGTCAT GGCGACGGGC
GTGACCATCC TGCACCTCGT CGCCGGGGTA CTCGCCGCCT GGTCGTTCGT CCGTTTCTCC
CACGCCGGGC AGCGGCTCGT CTCCGCGCTG GTGGTCATCG CCCTCGTCGT CCCGCCGCAG
GCCCTGATGA TCCCACAGTT CCTGCTGGTC TCCCGGCTGG GCTGGCGCAA CACCTTCGCC
GGGCTGATCG TGCCGCAGCT GGCCACCTGC TCGCTGGCGG TGCTGCTGCT GCGCGAGCAC
ATCCGCGGCA TCCCGCCGAC CCTGCTCGGC GCCGCGACCC TCGATGGCGC CAGCCACGCC
GAGACGCTGC GCCACATCGT CCTGCCGCTG CTGCGCCCCG CGCTCGCGGC GGTGGCCGTC
GTCGTGTTCA TCACGACGTG GAACGAGTAT CTCTGGCCCA CCCTCGTCGC GCCCCACCGG
GACACGACGA CCATCCAGCC GGGCCTGCAG ATGTTCGAGA CCCAGGAGGG CCCGGAGTAC
GGCCCGTTGC TCGCCGGGGC CATGCTCGCC TCGATCCCGG TGACCATCGT CTATCTCTTC
GCCTCCCGCC GCATCACCGA CGCTTTCCTC CAAGCTGGCC TGAGATGA
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| Protein sequence | MPRSDVQATR AAGRHVVLAV AVVAMLFPML WALTTSFKPP ADIYGANPLP IPASLSNYRN
AIDGFPIGRL LLNTFVMATG VTILHLVAGV LAAWSFVRFS HAGQRLVSAL VVIALVVPPQ
ALMIPQFLLV SRLGWRNTFA GLIVPQLATC SLAVLLLREH IRGIPPTLLG AATLDGASHA
ETLRHIVLPL LRPALAAVAV VVFITTWNEY LWPTLVAPHR DTTTIQPGLQ MFETQEGPEY
GPLLAGAMLA SIPVTIVYLF ASRRITDAFL QAGLR
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