Gene Francci3_2251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2251 
Symbol 
ID3905019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2628357 
End bp2629178 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content70% 
IMG OID637879582 
Productbeta-lactamase-like 
Protein accessionYP_481348 
Protein GI86740948 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.174345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0139422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGA CCGTCCTGGG CTGCCGGTCG GGAATGCCGA CCGGCGGTCA GTGCAGCTCC 
AGCTACCTCG TCTGCACCGC GGAGACGAAG ATGCTGCTGG ACTGCGGCCC CGGCGCCGCG
ACGGCGCTGA GCGCGCTGGG GCATCCCGCG GTGCTCGACG GTATTGTGAT CAGTCATCTG
CATTCCGATC ACTGCTATGA TCTCCTGCCG GTGGGGAAGG CATTGCTGGC CAGCCGGACC
CGGTATCCCA TGCGATTCCC GACGCTGCCG GCACGCGACA TTCCGACGCG CAGCGAACCG
ATTCCGCTTT ACCTTCCACG GGGCGGCCTG GACACCTTCC GGACATTGGC CGGACTATTT
CCGGTCGCGA CGATCCCGTT GCTGGACAAG GCGTTCGAGG TCGCCTTCGA CGTCCGCGAG
TACGACCCGG GGGAGACCTT CAAGATCGGC GACTGCCTGG TCAGCCTGCA CGGGCTGCGC
CACGCGGTAC CGAACTGCGG GATCCGCATC GAGACGGCGG ACGCCAGCCT CGCCTACACC
GGCGACACCG GAGTGACCGA CGCCCTCGTC GACCTCGCCC GCGGCGTCGA TCTCTTTCTC
GCCGAGGCCA CCCTCGAGCT GACCGACGAC AGCGACCACG GCCACCTCAG CGCCCTCGAC
GCGGCCGAGG CGGCCCGGCT CGCCGGGGTG GGTCAGCTCG TGCTCACCCA CTTCGTCACC
GACGACCCCG AGTGGCTGGC CGCGCGGCGC GCCGAGGCCG AGCGGGTGTT CGACGGGCCG
GTGCACCTGG CCGCCCCGGC CCGCAAGTTC GACGTCGCAT GA
 
Protein sequence
MRLTVLGCRS GMPTGGQCSS SYLVCTAETK MLLDCGPGAA TALSALGHPA VLDGIVISHL 
HSDHCYDLLP VGKALLASRT RYPMRFPTLP ARDIPTRSEP IPLYLPRGGL DTFRTLAGLF
PVATIPLLDK AFEVAFDVRE YDPGETFKIG DCLVSLHGLR HAVPNCGIRI ETADASLAYT
GDTGVTDALV DLARGVDLFL AEATLELTDD SDHGHLSALD AAEAARLAGV GQLVLTHFVT
DDPEWLAARR AEAERVFDGP VHLAAPARKF DVA