| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2221 |
|---|
| Symbol | |
|---|
| ID | 3906360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2595698 |
|---|
| End bp | 2596108 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637879552 |
|---|
| Product | phenylacetic acid degradation-related protein |
|---|
| Protein accession | YP_481318 |
|---|
| Protein GI | 86740918 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.558546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCG ACATCGCCGT GGCCCGCGGG CTACTCGCAG CCCAGCCCTT CAGTCGACTG
CTCGGCGCCC GGCTCAGTCG CTTCGAGGCG GGGGTGGCCG AGCTGACCAT CCCGCTCGGA
GATCATCTAC GCCAGCAGCA CGGCGCCGCG CACGGCGGGG CGCTGAGCTA TGCCGCCGAC
ACTGCCCTCA CCTTCGCCGC CGGCAGCGTC GCGGGGGACG CCGTCCTGAC CTCCGAGATG
AAGATCAACT ATCTCCGGGG GGCGCGGGGC GACGAGCTCA TCGCCCGTGC CGAGGTCGTC
CACGCCGGCT CCACTCTGGT TACCGTGCGC TGCGAGGTCT TCGACCGCGG CGGAGACAGG
GACGGGGAAC GGCTCTGCGC CGTCGCGCTC GGCACCGTCG CGCGCCGCTG A
|
|---|
| Protein sequence | MTPDIAVARG LLAAQPFSRL LGARLSRFEA GVAELTIPLG DHLRQQHGAA HGGALSYAAD
TALTFAAGSV AGDAVLTSEM KINYLRGARG DELIARAEVV HAGSTLVTVR CEVFDRGGDR
DGERLCAVAL GTVARR
|
|---|
| |