| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2197 |
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| Symbol | |
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| ID | 3906336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2569242 |
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| End bp | 2570618 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637879529 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_481295 |
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| Protein GI | 86740895 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.187035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCCA TTGCTGCTAT TCCCGCCGCT TCGGGATCCC GAGTGGATCC GGTCCGTGTC
TTGCAGCACA CGCTGTACCG GGCGGCCAAG GCCGATCCCG GGCGGAGGTT CCATGCGCTC
TCGGACAAGG TCCACCGTGG GGACGTCCTG GAGCGTGCGT GGGCACTGGT GCGCGCCAAC
AGGGGCGCGC CGGGCATTGA CCGGACCACC ATTGCCCAGG TCGAGGAGTA CGGGGTGTCC
CGTCTTCTCG ACGAGCTGGG CGGCGAATTG CGGGAAGGGG GGTACCGTCC TTTGCCTGTG
CGCCGGGTAG AAATTCCCAA GCCGGGGGAC AAGGGTGCGT CCCGGCCGCT GTCGATCCCT
GCCGTCCGCG ACCGTGTGGT GCAGACCGCC GTGAAGATCG TGCTCGAGCC GGTCTTCGAG
GCGGACATGG CCGGGTGCTC GTTCGGGTTC CGCCCGCGGC GCTCGGCTCA TGACGCACTG
CAAGTGCTGG TGGATGCGTG CGGGAAGGGC CGTCGGTGGG TGGTGGAGAC GGATATCGCT
GATTGCTTTA CGGCGATCCC GTTCGAAGGG TTGATGCAGA CGATCAAGGA ACGGGTCTGC
GACCAGGCGA TGCTCAGGTT GGTGCGTGCT GTCCTGCGTG CCGGCGTGAT GCGCGACGGC
GAGGTCCGGA GGCCGGTCAG CGGAATGTCC CAGGGCGGGC CGCTGTCCCC ATTACTCTGT
AACGTCTACC TGAACCGGCT TGACCGGGAA TGGGACGACG GGGACGGGAT GATGGTCCGG
TTCGCGGACG ATATCGTCGT GATGTGCTGG TCGGAGGATC AGGCGGTGCG GGCGATGGAT
TGTCTGGTCC GGTTGCTCGC TGATCTGGGG CTGGAGACCA AGGCAGCCAA GACCCGTATC
GTTCACCTAC AGGTGGGAGG GGATGGTCTT GAGTTCCTGG GCTTCCATCA CCGCCTGGTG
CTGTCGCGGG GTGACCGGGG CAGACGGAGG GTGGCGTTTC TTGCGCGCTG GCCCTCGGAC
AGGGCCATGC AGCATGCTCG GGATCGGATT CGGGAGATTA CGGGACGGTC CAGGCTGCTG
CTTAATCCAG AGGCGGTCGT GCGGGAACTG AACCTGTTCC TGCGTGGCTG GGCCGGATAT
TTCCGCTACG GATATTCGGC ACGGCGCCTT GCTATGATCA GGCGGTTCGC GCAGGTACGG
CTGGCTCGGT TTGTTCGGGC CAGACACCGG CGCAGCATGG GCTTCGGCTG GCGGGTGCTG
ATACGCTCCC GGCCGGTGGA CCTCGGCCTG GTCAGCCTGT CTGGGATTGT CGTCACTCCC
AGGGCCGGAA AGCTCTGGCG GGAGAGACCG AATGCCGGCG GTGAACGGCG TCGGTAA
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| Protein sequence | MSAIAAIPAA SGSRVDPVRV LQHTLYRAAK ADPGRRFHAL SDKVHRGDVL ERAWALVRAN
RGAPGIDRTT IAQVEEYGVS RLLDELGGEL REGGYRPLPV RRVEIPKPGD KGASRPLSIP
AVRDRVVQTA VKIVLEPVFE ADMAGCSFGF RPRRSAHDAL QVLVDACGKG RRWVVETDIA
DCFTAIPFEG LMQTIKERVC DQAMLRLVRA VLRAGVMRDG EVRRPVSGMS QGGPLSPLLC
NVYLNRLDRE WDDGDGMMVR FADDIVVMCW SEDQAVRAMD CLVRLLADLG LETKAAKTRI
VHLQVGGDGL EFLGFHHRLV LSRGDRGRRR VAFLARWPSD RAMQHARDRI REITGRSRLL
LNPEAVVREL NLFLRGWAGY FRYGYSARRL AMIRRFAQVR LARFVRARHR RSMGFGWRVL
IRSRPVDLGL VSLSGIVVTP RAGKLWRERP NAGGERRR
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