Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2176 |
Symbol | |
ID | 3906776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2550550 |
End bp | 2551317 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637879509 |
Product | hypothetical protein |
Protein accession | YP_481275 |
Protein GI | 86740875 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.27498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.445342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGATA TTACCAGAAT TCGGCGCCTG CTGCCAGCGC TCGTCGCGGC CCTGGCGCTG ACGATAGTCT CGGCTCCGGC CGCTAACGCG GCGTCGGGCA ACCCGGGTGT CGTGCCCCCG GGGGCACGCG TATTTGGGAA GAGCTATGGT GCCTGGTCGG CGGCATGGTG GCAGTACGCA CTGGCGCAGC CAACCACCAC GAACCCGCTG ATTGACCCAA CTGGCGCGTT GTGTAACGTG GGCCAATCTG GCTCGGTATT CTTCCTGGTC GGCGCCTTCG GTGGCGAAAA AGTCGTTCGA AACGATTGCA CGGTACCCGC GGGCAAGGCA CTCTTCTTTC CGCTCGTCAA CGTCTTCGAC GCCAACAACC CCGGGGAAAA TCGCACGGCC CGGGAGCTGT GGCGCGAGAT GGAGGCAGGC TTGTCGTTCG CCAACCTCCA CGCCAGCGTC GATGGCATAC CAGTAGGAAA GCTGCGAAGG TACCGGGCTT GCGCCGGACC CGTCCACCGG TGCGCGCATC CGTTCAGCAT CACGCTCCCC GATGACAACA TCTTCAATGC CCCGGCGGGC ATCTACACGC CTGCCGTGGC TGACGGCATC TACCTACTCC TCAAGCCACT TGCGCCGGGC CGCCACACGA TCACCTTCGG TGGAACCGGA CGATCCGACA TCACCGGCCC CTTCTCCGCA GATATCACCT ACCATCTCAC CGTCCGGCCA GGCCATCACC ATGTTCACGA TCGGTACGCG TCGAGTTCCG ACAAGTAG
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Protein sequence | MVDITRIRRL LPALVAALAL TIVSAPAANA ASGNPGVVPP GARVFGKSYG AWSAAWWQYA LAQPTTTNPL IDPTGALCNV GQSGSVFFLV GAFGGEKVVR NDCTVPAGKA LFFPLVNVFD ANNPGENRTA RELWREMEAG LSFANLHASV DGIPVGKLRR YRACAGPVHR CAHPFSITLP DDNIFNAPAG IYTPAVADGI YLLLKPLAPG RHTITFGGTG RSDITGPFSA DITYHLTVRP GHHHVHDRYA SSSDK
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