Gene Francci3_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2176 
Symbol 
ID3906776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2550550 
End bp2551317 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID637879509 
Producthypothetical protein 
Protein accessionYP_481275 
Protein GI86740875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.27498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.445342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGATA TTACCAGAAT TCGGCGCCTG CTGCCAGCGC TCGTCGCGGC CCTGGCGCTG 
ACGATAGTCT CGGCTCCGGC CGCTAACGCG GCGTCGGGCA ACCCGGGTGT CGTGCCCCCG
GGGGCACGCG TATTTGGGAA GAGCTATGGT GCCTGGTCGG CGGCATGGTG GCAGTACGCA
CTGGCGCAGC CAACCACCAC GAACCCGCTG ATTGACCCAA CTGGCGCGTT GTGTAACGTG
GGCCAATCTG GCTCGGTATT CTTCCTGGTC GGCGCCTTCG GTGGCGAAAA AGTCGTTCGA
AACGATTGCA CGGTACCCGC GGGCAAGGCA CTCTTCTTTC CGCTCGTCAA CGTCTTCGAC
GCCAACAACC CCGGGGAAAA TCGCACGGCC CGGGAGCTGT GGCGCGAGAT GGAGGCAGGC
TTGTCGTTCG CCAACCTCCA CGCCAGCGTC GATGGCATAC CAGTAGGAAA GCTGCGAAGG
TACCGGGCTT GCGCCGGACC CGTCCACCGG TGCGCGCATC CGTTCAGCAT CACGCTCCCC
GATGACAACA TCTTCAATGC CCCGGCGGGC ATCTACACGC CTGCCGTGGC TGACGGCATC
TACCTACTCC TCAAGCCACT TGCGCCGGGC CGCCACACGA TCACCTTCGG TGGAACCGGA
CGATCCGACA TCACCGGCCC CTTCTCCGCA GATATCACCT ACCATCTCAC CGTCCGGCCA
GGCCATCACC ATGTTCACGA TCGGTACGCG TCGAGTTCCG ACAAGTAG
 
Protein sequence
MVDITRIRRL LPALVAALAL TIVSAPAANA ASGNPGVVPP GARVFGKSYG AWSAAWWQYA 
LAQPTTTNPL IDPTGALCNV GQSGSVFFLV GAFGGEKVVR NDCTVPAGKA LFFPLVNVFD
ANNPGENRTA RELWREMEAG LSFANLHASV DGIPVGKLRR YRACAGPVHR CAHPFSITLP
DDNIFNAPAG IYTPAVADGI YLLLKPLAPG RHTITFGGTG RSDITGPFSA DITYHLTVRP
GHHHVHDRYA SSSDK