Gene Francci3_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2174 
Symbol 
ID3906774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2547669 
End bp2548178 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content67% 
IMG OID637879507 
Productheat shock protein Hsp20 
Protein accessionYP_481273 
Protein GI86740873 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.150669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.4191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTAC CCGTACGACG CGGAGAAGGC CTGGGAACGC TGGCACGGTG GGATCCGTTC 
CGGGAGATCG AGGACGCCTG GACCCGCATG GGCAATCTGC TCGGCGACGT CATAGGCGGC
GTCGAGGGCC GTCCGGCGCG GTTGCTGGGC GGCATGGTGC AGCCGGTCGA CATTGAGGAG
ACCGAGGACG CGTTCGTGAT CGATCTCGAT CTTCCCGGGG TGCGCCGGGA GGACATCTCC
GTGGACCTGC GTGACAACGA GCTGTTCGTC ACCGGTGAAA TCAAGGAGCG GGAACGCACG
GGAGTACTGC GCCGCCGTAG CCGCCCGGTG GGCCGGTTCG AGCACCGCAT CGCCGTGCCG
GGTGACATTG ATCCGGAATC GGTGCACGCC ACCCTGGCCG ACGGAGTACT CACCATCCGG
CTGGCGAAGG CCAAGCGGAG CCAGCCCAAG CACATCGAGA TCAGCACCGG CCCCGAGGGC
CAAGGCACCG GCCCCGAGGG CCAAAGCTGA
 
Protein sequence
MTLPVRRGEG LGTLARWDPF REIEDAWTRM GNLLGDVIGG VEGRPARLLG GMVQPVDIEE 
TEDAFVIDLD LPGVRREDIS VDLRDNELFV TGEIKERERT GVLRRRSRPV GRFEHRIAVP
GDIDPESVHA TLADGVLTIR LAKAKRSQPK HIEISTGPEG QGTGPEGQS