Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2174 |
Symbol | |
ID | 3906774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2547669 |
End bp | 2548178 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637879507 |
Product | heat shock protein Hsp20 |
Protein accession | YP_481273 |
Protein GI | 86740873 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.150669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.4191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTAC CCGTACGACG CGGAGAAGGC CTGGGAACGC TGGCACGGTG GGATCCGTTC CGGGAGATCG AGGACGCCTG GACCCGCATG GGCAATCTGC TCGGCGACGT CATAGGCGGC GTCGAGGGCC GTCCGGCGCG GTTGCTGGGC GGCATGGTGC AGCCGGTCGA CATTGAGGAG ACCGAGGACG CGTTCGTGAT CGATCTCGAT CTTCCCGGGG TGCGCCGGGA GGACATCTCC GTGGACCTGC GTGACAACGA GCTGTTCGTC ACCGGTGAAA TCAAGGAGCG GGAACGCACG GGAGTACTGC GCCGCCGTAG CCGCCCGGTG GGCCGGTTCG AGCACCGCAT CGCCGTGCCG GGTGACATTG ATCCGGAATC GGTGCACGCC ACCCTGGCCG ACGGAGTACT CACCATCCGG CTGGCGAAGG CCAAGCGGAG CCAGCCCAAG CACATCGAGA TCAGCACCGG CCCCGAGGGC CAAGGCACCG GCCCCGAGGG CCAAAGCTGA
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Protein sequence | MTLPVRRGEG LGTLARWDPF REIEDAWTRM GNLLGDVIGG VEGRPARLLG GMVQPVDIEE TEDAFVIDLD LPGVRREDIS VDLRDNELFV TGEIKERERT GVLRRRSRPV GRFEHRIAVP GDIDPESVHA TLADGVLTIR LAKAKRSQPK HIEISTGPEG QGTGPEGQS
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