Gene Francci3_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2168 
Symbol 
ID3906768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2539490 
End bp2539999 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID637879501 
ProductMaoC-like dehydratase 
Protein accessionYP_481267 
Protein GI86740867 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.234418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.625533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCG GGCGTTACTT CGAGGAGTTC GAGGTAGGTG CGGTTTACAA GCACTGGCCG 
GGCAAGACGG TCACCGAGTA CGACGACCAT CTCTTCTGCC TGCTCACGAT GAACCATCAT
CCGTTGCACC TGGACTCTCA TTTCGCCGAG GAGACCACTC AGTTCAAACG GAACGTCGTC
GTCGGGAACT ACGTTTACTC CCTGCTGCTG GGAATGTCGG TGGCCGACGT ATCCGGGAAG
GCGATCGCCA ACCTGGAAGT CGAGTCGCTA CGGCACGTGA AGCCGGTGTT CCACGGTGAC
ACGATCTACG GCGAGTCCAC CGTCCTGGAC AAGGTCGAGT CGAAGAGCAA GGACGACCGC
GGGATCGTCA CCGTCGAAAC CCGCGGTTAC AACCAGGACG GCGTCCTTGT CTGCATCTAC
CGCCGCAAGG TCATGGTGCC CAAGCGGGCC TACGGCGAGG CACGCGGCGG CGAGCAGCCT
GGCCGGCCGG AACCCCGGAC GGAAGGCTGA
 
Protein sequence
MQFGRYFEEF EVGAVYKHWP GKTVTEYDDH LFCLLTMNHH PLHLDSHFAE ETTQFKRNVV 
VGNYVYSLLL GMSVADVSGK AIANLEVESL RHVKPVFHGD TIYGESTVLD KVESKSKDDR
GIVTVETRGY NQDGVLVCIY RRKVMVPKRA YGEARGGEQP GRPEPRTEG