Gene Francci3_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2156 
Symbol 
ID3906756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2525283 
End bp2526044 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content71% 
IMG OID637879491 
Productphosphonate ABC transporter ATP-binding 
Protein accessionYP_481257 
Protein GI86740857 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3638] ABC-type phosphate/phosphonate transport system, ATPase component 
TIGRFAM ID[TIGR02315] phosphonate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.440278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG TCCGCTTCGA GGGGGTGACC AAGCGGTTCG GCCAGACGCT CGCCCTCGAC 
GAGGTGTCGT TCACCGTCGA GCCCGGCGAG GTGGTCGTCC TGCTGGGGCT GTCCGGTTCG
GGCAAGTCGA CGCTCCTGCG GCACGTCGAC GGCCTGCATG GGGCAAGCGC GGGCCGGGTC
ATCGCGCTCG GCACGGACGT CGGCCAGGCG CGGGGCGCGC GGTTGCGGGA GCTGCGTCGC
CGGATCAGCT TCGTGTTCCA GCAGTTTCAC CTGGTCGACA GCCTCTCGGT GCTGGAGAAC
GTGTGCACCG GCGCGCTCGG CAGGCTGCGT GGCCTGCGGC TGGGTCTGGT CACCTATCCG
CGGGCGGTGC GACTCGAGGC GCTGGAGCAC TTGGAACGGG TCGGGCTCGC GTCACAGGCG
TTCCAGCGCG CGGACACGCT GTCGGGCGGG CAGCAGCAGC GGGTCGCGGT CGCGCGGGCA
CTCATGCAAC GCCCGGAGAT CCTGCTCGCG GACGAGCCGG TTGCCTCCCT GGACCCGGAG
TCCTCGGCGC AGGTGATGGG CCTGATCCGC GAAATCGCGA GCGAACGGAA CCTGACCGTG
CTGTGCAGCC TGCACCAGGT CGAGCTGGCG CTGTCGTGGG CCGACCGGAT CGTCGGGTTG
CGCTCGGGCC AGGTCGTGCT GGACAAGGCT GCGGGCGACC TTGACCACCA GCAGGCCGTT
GCCATGATCT ACCGAGCCGG CCCGCTGCGG GCCATCGCGT GA
 
Protein sequence
MSAVRFEGVT KRFGQTLALD EVSFTVEPGE VVVLLGLSGS GKSTLLRHVD GLHGASAGRV 
IALGTDVGQA RGARLRELRR RISFVFQQFH LVDSLSVLEN VCTGALGRLR GLRLGLVTYP
RAVRLEALEH LERVGLASQA FQRADTLSGG QQQRVAVARA LMQRPEILLA DEPVASLDPE
SSAQVMGLIR EIASERNLTV LCSLHQVELA LSWADRIVGL RSGQVVLDKA AGDLDHQQAV
AMIYRAGPLR AIA