| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2154 |
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| Symbol | |
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| ID | 3905544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2522541 |
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| End bp | 2524259 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879489 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_481255 |
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| Protein GI | 86740855 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.32555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAG AGGGTCGCGG ACCGGCCAAG CCGGTGCGGG TGGGTGCGGG CAGCGGGACA
CCGGCCTGGC CCGCCGGCGA CGGTGCGCAC GCGTCGCGAC TTGAGACCGT CGCATCCTGG
GCCGCCGTGT TCACGATCGT GATGGCCGCG GTCACGCTAC TCGGTTGGAC CCTGGACAAC
CACGTGCTCA CGAGCATCAA ACCCGTCTGG CCGTCGACGA AACCAAACGG AGCCGTCTGC
GGTCTGCTGC TCGGGTTCTC GCTGTGGAGC CGACTCGGCC GGCGGCGAAC CGCCGTCCGG
GCGGCGGGAC AGGGGGCCGC CGCCCTTGCA CTGGCGATCT CCGGACTCTC TCTCGTCGAG
TCGGCCGTGG ATCGGAATTT CGGCATAGAC GAACTTCTCT TCATCGACCA GGCCACAGCC
TCGCAGTCTC ATCCGGGGCG GATCGTGCCT TTCGGCGCGG CCATTCTGGC GCTGTTGTCG
CTCGCCCTGC TACTGTTCGA TACCCGCCGG TGGCGAGGAA GGTACGTGGC CCAGGCCCTG
GTCTGCGTCG CGGGGTTCAT CTCCTTTACG GTGCTGCTGA GCTATCTGTA CGGGGTCGAT
TTCACTTCCG GTTACACGAG GGTCGCCGTC CCGGCGGCGG TCGCCACGCT GGTGCTGTCG
GTCGGAGCGA CGCTGGCGCG GTTGGGTTAT ACCCCGCTGG CGATCCTGGC GAGTTCCGGG
GCCGGCGGGG GCGTCGCCCG CCAGTTGCTG CCGGCCACGG TCATCGTCCC GGTCCTTGTC
GGGACGACCG CGGTGGCGCT GTGGCGGCTC GGGTTCTACG GCGTCGCGTT CCGGGGTGCC
CTGGTGGTCT CCTATACCGT GGTCATGCTG CTGGCGGTCA CCGTCGGGAT CTGCCGGCGG
CTGGATCATG CCGATGCCGA AAGACTGCGC GTCTCCGCCG ATCTGGCCGC GGCCAACGAG
CGGTTGGCGG GGACGAACGC CCGGTTGGCG GAGGCGAACA CGCGCCTCGT CGAGGCCAAC
AAGCGGATGC ACGAGGCCAT CGACGAGCTC GGCAGTTTCA CCTACAGCGT CTCCCACGAC
CTGCGGGCGC CACTGCGGTC GATGAGCGGT TTCTCCCGAA TCCTGATGGA CGAGTACGCC
GAGGACATGC CCGAGCAGGC CCGCGGCTAT CTCGACCGGG TGCAACGCAG CTCCGACCGG
ATGGGCGCGT TGATCGACGA CCTGCTCGCC TTCTCCCGCC TGGGCAGGCA GCCCATGAGT
AAGCGGGAGG TGGACCCGGC GGCGATCGTG TCCGCGGTGC TGGCGGAGCA AGAGGGCGAC
CGCGCCGGCC GCCCGGTGCG GATCACCGTC GGGGATCTTC CCCGTGGGGT GGCCGACCCG
GTGCTGCTCA AGGTGGTCTA CACCAACCTG CTGTCGAACG CGGTCAAGTT CACCCGGGGC
CGTGACCCCG CCCGCATCGA GATCGGCAGC CGCCGCGAGA ACGGGCGGGT GGTCTTCTAC
GTCGCCGACA ACGGGGCCGG TTTCGATCCG CGGTATGCGG ACAAGCTGTT CGGGGTGTTC
CAGCGGCTGC ACCGCTCGGA ACAGTTCGAG GGAACGGGTG TCGGTCTCGC GCTGTGCCAG
CGCGTCATCG CCCGCCATGG CGGGCGGATC TGGGCGGAGG CGGCGCAGGG GAAAGGCGCG
ACCTTCTTCT TCACTCTGAG CGAGGAGGTA TCGGCGTGA
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| Protein sequence | MNPEGRGPAK PVRVGAGSGT PAWPAGDGAH ASRLETVASW AAVFTIVMAA VTLLGWTLDN
HVLTSIKPVW PSTKPNGAVC GLLLGFSLWS RLGRRRTAVR AAGQGAAALA LAISGLSLVE
SAVDRNFGID ELLFIDQATA SQSHPGRIVP FGAAILALLS LALLLFDTRR WRGRYVAQAL
VCVAGFISFT VLLSYLYGVD FTSGYTRVAV PAAVATLVLS VGATLARLGY TPLAILASSG
AGGGVARQLL PATVIVPVLV GTTAVALWRL GFYGVAFRGA LVVSYTVVML LAVTVGICRR
LDHADAERLR VSADLAAANE RLAGTNARLA EANTRLVEAN KRMHEAIDEL GSFTYSVSHD
LRAPLRSMSG FSRILMDEYA EDMPEQARGY LDRVQRSSDR MGALIDDLLA FSRLGRQPMS
KREVDPAAIV SAVLAEQEGD RAGRPVRITV GDLPRGVADP VLLKVVYTNL LSNAVKFTRG
RDPARIEIGS RRENGRVVFY VADNGAGFDP RYADKLFGVF QRLHRSEQFE GTGVGLALCQ
RVIARHGGRI WAEAAQGKGA TFFFTLSEEV SA
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