| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2118 |
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| Symbol | |
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| ID | 3905508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2484319 |
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| End bp | 2486136 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879453 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_481219 |
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| Protein GI | 86740819 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.227418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.486625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGG ACGTGACCGC CGCCGAGCCG ACCCTGGTCG TCGAGCGGCT GGACGTGACG
TTTCGGGACG GCGTCGCCGG CGTGCGTGCG GTGCGGGACG TGTCGATCGC CGTCCGTCCC
GGCGAGTGTC TCGCGGTCGT GGGCGAGTCC GGTGCCGGCA AGAGCGTGCT CGCCCGGACG
CTGATCGGAC TGGCCGGGCG CGGTGCGATG GTCCGTGCTG GCCGGCTGGA CCTGCAGGGC
GTGGATCTGA CCGCCTTGAC CGAACCGGGG TGGCGGGTGT TGCGAGGCCG CCGGATCGGG
TTGGTGCCCC AGGACGCGTT GGCCTCCCTG GATCCGCTGC GGACGGTGGG AGCGGAGGTG
GCCGAGCCCC TGCGCGTCCA CCGGATCGTG GCCCGTCGCG ACGTCCGCGA GCGGGCCGTC
GCGACGCTTG GGCAGGTGGG GGTGCCGGAG CCGGCCCGGC GCGCCGGGCA GTACCCGCAT
CAGCTCTCTG GCGGTCTGCG ACAGCGGGCC CTGATCGCCT CGACGGTCGC GGCCGGACCC
GACCTGCTGC TGGTCGACGA ACCCACGACC GCGTTGGATG CCGCCTCCCG GGAGCGGATC
GTCGAGGTGC TGCGCGGCCT GGTACGCGGC GGTGTCGCTC TGCTGTTGAT TAGTCACGAT
CTTGCCACGG TGGCCGCCGT CGCCGACCGG GTGGCGGTCA TGTACGAGGG GCGGATCATC
GAGCAGGGAC CGGCCGTCGA CGTGCTTGGC GGTCCACGGC ATCCGTACAC CTGCGCGTTG
CTCGCGGCGG CCCCCTCGCG GCACTCGCGG GGCACCGTGC TGTCCCCGGA CCTGCCGCGC
CGTCCACCGG CCGGGCCGGA CGGCTGCCCA TACGCGGTGC GCTGCCCACT CGCCGACCAC
TGGTGCCGCG AGGAACTGCC GCGCCCCGAT CACCCGGGTC TCGAACCCGG CGTCCTGTGC
TGGCGGCCCG GAACGGAAAC GGAGCGGGCC GGACCGCCAC GGGTCGTCGC CCCGGCCCGC
AGGGACACCG CCGAGGCTCT CGTCGAAGCC ACCGGCATCA CCAAACGTTT CCGCGATCCC
GACGGGGGGT GGCGGGACGC CGTCCGTGCC GTGACGTTCG AGCTTCGTGC CGCCGAGACA
CTCGGCGTCA TCGGTGGGTC CGGGTCCGGC AAGACCACGC TGGCCCGCAT CGTGCTCGGC
CTGCTCGAAC CGGACGAGGG TACCGTCCGG TTCGCCGGCG CGCCCTGGGT GGCGGCCGCG
GCGGCGACCG CCTCGCCCAG CCGGGTACGC GAACGTGACC GCAGGCCTCG GCGGCACCGG
ATACAGGCCG TCCACCAGGA CTGCCTGAGC TCATTCGACC CGCGTCACAC CGCCGAGCGG
ATCGTCGGCG ACGCCATGTC CGGTCCGGAT CGGGGCCGGG CGCGACGAGA TCGGATCGTC
GCACTCCTCG ACCAGGTAGG GCTGTCCGAA CAGGTGCTGC GACGCCACCC TCGCGAGCTG
TCCGGCGGGC AGCGTCAGCG GCTGGCGATC GCGCGTGCGC TCGCGCCGTC ACCCGAGGTC
CTCGTCTGCG ACGAACCGGT GTCCGCGCTC GACCTGTCGG TGCAGGCCCA GATCCTCGAC
CTGCTGGCGG GACTGCGCGA CGAACTCGGC TTGGCCCTGC TGTTCATCTC CCACGATATC
GCAGTGATCC GGCACGTCAG CGACCGCGTC CTGGTGATGA AGGACGGGCA GGTGGCCGAG
ATCGGCGGCG CGGAGCAGGT GCTCGAGCGC CCCGCGCACC CGTACACCCG GCATCTGCTG
GCCGCGGCCC GCACCTGA
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| Protein sequence | MSPDVTAAEP TLVVERLDVT FRDGVAGVRA VRDVSIAVRP GECLAVVGES GAGKSVLART
LIGLAGRGAM VRAGRLDLQG VDLTALTEPG WRVLRGRRIG LVPQDALASL DPLRTVGAEV
AEPLRVHRIV ARRDVRERAV ATLGQVGVPE PARRAGQYPH QLSGGLRQRA LIASTVAAGP
DLLLVDEPTT ALDAASRERI VEVLRGLVRG GVALLLISHD LATVAAVADR VAVMYEGRII
EQGPAVDVLG GPRHPYTCAL LAAAPSRHSR GTVLSPDLPR RPPAGPDGCP YAVRCPLADH
WCREELPRPD HPGLEPGVLC WRPGTETERA GPPRVVAPAR RDTAEALVEA TGITKRFRDP
DGGWRDAVRA VTFELRAAET LGVIGGSGSG KTTLARIVLG LLEPDEGTVR FAGAPWVAAA
AATASPSRVR ERDRRPRRHR IQAVHQDCLS SFDPRHTAER IVGDAMSGPD RGRARRDRIV
ALLDQVGLSE QVLRRHPREL SGGQRQRLAI ARALAPSPEV LVCDEPVSAL DLSVQAQILD
LLAGLRDELG LALLFISHDI AVIRHVSDRV LVMKDGQVAE IGGAEQVLER PAHPYTRHLL
AAART
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