| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2115 |
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| Symbol | |
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| ID | 3905642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2480899 |
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| End bp | 2482434 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879450 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_481216 |
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| Protein GI | 86740816 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.435863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.188347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGGGG GAACCCTGAC CTACGCGATC GACGCGGAGC CGACCTGCTT CGACATCCAC
GCCAGCCAGC AGGACGTCAC CGCGAGCGTC CTCCGCAACG TCTTCGACTC ACTCGTCGCG
CAGGACGACG CCGGTCATTT CCACCCCTGG CTGGCGACGT CCTGGGACAT CACCGACGGC
TTGCGCACCT ACACCTTTCA TCTGCGCCAC GGCGTGACCT TCACCGACGG CAGCGCCTTC
GACGCGGCGG CGGTGCGGGC CAACTTCGCG CACATCGTCG CGAAGCAGAC CAGGTCGCAG
TACGCCGCGA GCCTGCTCGG CCCGTACGCC GGCACCGACG TCGTCGATCT CTACACCGTA
CGGGTGCGTT TCAGCCGGCC GTTCGCCCCG TTCCTCCAGG CCGCCAGCAC CACCTATCTC
GGCTTCTACT CGCCGAAGGT CCTCGCCACC GACGCCGCGC AGCTGTGCGC GGGCGGGCCA
CGAGCGGTTG GTACCGGGCC GTTCTCCGTC ACCAGTCGCA CCCGAGGCCA GCGCATCGTC
CTGACCAGGA ATCCGGCCTA TGACTGGGCG CCCGCGACCG CGCGGCACTC CGGCCCCGCC
TACCTCGACC GGATCGTCAT CCGCATCCTG AAGGAGAACT CCATCCGGGT CGGCGCGCTG
ACCAGCGGGC AGGTCGACGT CGCCGCCGCC GTGCCACCGG CGGACGCGCG GTCCGTCGGC
GCCGACCGGA ATCTGCGGCT GCTGCGGAAG GACGTGCCGG GAGTCCCCTA CAGTCTCTAC
CTGAACACGT CGCTGGCGCC TTTCACCGAC CGCCGGGTCC GCACCGCGAT CCAGCGGGGA
ATCAACGTGG ACCGGAATGT CGGCGCCGTG TACTTCGGTC AGTACCGGCG AGCCTGGGGC
CCGCTGACGG ACGTCACTCC CTCCTACGAC GCGACCGTCA GGCAGAGCTG GCCCTACGAC
CCAGTCAAAG CCGGCCAGCT GCTCGACGAG GCCGGTTGGG CCAGGCGCGA CGGCGCCGGG
TTCCGCGTGC GCGACGGCCG GCGGCTGAGC ATCTCCTGGC CGGTCGTGCC GACGTACCTG
CGCGACCAGC GTGATGTGCT CGGCCAGGCG ATCCAGGCCG ACCTGCGGAA GCTGGGCGTG
GAGGTCACCC GTCCCAGTCT CGACGTCGGC ACCTACCTGG CGCTCTCCTA CAGCAACAAG
GCGCAGATGC TGGACTTCAG CTGGAGCCGT GCTGATCCGG ATGTGCTGCG GCTGTTCTTC
AACTCCGCCA GCTCCCCGGC ATCTGGCGGG CAGAACATGG CGCAGCTGGC CGACGCGGAG
GTGGACCGGC TGACGGTCGA CGGCGCGGAG AGCCTCGACC GGACGGCCCG CGACGACCTG
TACGGGCGGG TCCAGCACGA CGTGCTCGCC AGCGCGGCTG TGGTCCCGCT CTACACGCCC
AGCTCGATCC TGGGCGTGGC CCGACGGGTC GACGGCATCG GCGTCGACCC GAACGCCTGG
CCGCTCTTCT TCGATGCCTG GCGCGTCTCC GGGTAG
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| Protein sequence | MRGGTLTYAI DAEPTCFDIH ASQQDVTASV LRNVFDSLVA QDDAGHFHPW LATSWDITDG
LRTYTFHLRH GVTFTDGSAF DAAAVRANFA HIVAKQTRSQ YAASLLGPYA GTDVVDLYTV
RVRFSRPFAP FLQAASTTYL GFYSPKVLAT DAAQLCAGGP RAVGTGPFSV TSRTRGQRIV
LTRNPAYDWA PATARHSGPA YLDRIVIRIL KENSIRVGAL TSGQVDVAAA VPPADARSVG
ADRNLRLLRK DVPGVPYSLY LNTSLAPFTD RRVRTAIQRG INVDRNVGAV YFGQYRRAWG
PLTDVTPSYD ATVRQSWPYD PVKAGQLLDE AGWARRDGAG FRVRDGRRLS ISWPVVPTYL
RDQRDVLGQA IQADLRKLGV EVTRPSLDVG TYLALSYSNK AQMLDFSWSR ADPDVLRLFF
NSASSPASGG QNMAQLADAE VDRLTVDGAE SLDRTARDDL YGRVQHDVLA SAAVVPLYTP
SSILGVARRV DGIGVDPNAW PLFFDAWRVS G
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