Gene Francci3_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2105 
Symbol 
ID3905632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2471104 
End bp2471685 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID637879440 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_481206 
Protein GI86740806 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.410647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGAAC CGATCGTGTG GATCCGGGGC GAACGCGCTG GGCTCGGCCC GTTCTCCAGC 
AACCTCGTCG ATCTTTACTG GCAGTGGGAG CAGGATCCTG GCGTCCTGGT CGGCTACGGT
CGCCAGACAC CGGACTCGCT GGAAAACCGG CGAGAGGGGT TCCAGCATCA GGCGCGCGGC
ACGGACGATC AGCTGAGGTT CACCGTCTAC GACGTGACCA CGGATCCGCC GACCCCCGCT
GGCACCACCG CCGTTCTCAT CGACCATCAC GTGCGAACCG GGGAGTTCGT GATCCAGCTC
GGCCCGGCCA GCCGTGGCAA CGGTATCGGT ACCGAAGCGA CGCGGCTCAC ACTCGACTAC
GCCTTTCACG TGACGAACCT GCGATGCGTC CACCTATCGG TACTCTCTCC GAACCTGGCT
GCGATCCGGG CCTACGAGAA AGCTGGTTTC CGCAGGATCG GGGAGCGTCG AAACTCCGGA
TACTGGCTGG GTGAGCTTGC CAACGAAACG CTGATGGACG CGATACCCGC CGACTTCCCG
GGGCCGTCTG CGGTACGGCA GGCCGTCGAG TCGGACCGGT AG
 
Protein sequence
MHEPIVWIRG ERAGLGPFSS NLVDLYWQWE QDPGVLVGYG RQTPDSLENR REGFQHQARG 
TDDQLRFTVY DVTTDPPTPA GTTAVLIDHH VRTGEFVIQL GPASRGNGIG TEATRLTLDY
AFHVTNLRCV HLSVLSPNLA AIRAYEKAGF RRIGERRNSG YWLGELANET LMDAIPADFP
GPSAVRQAVE SDR