Gene Francci3_2095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2095 
Symbol 
ID3905622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2462504 
End bp2463544 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content72% 
IMG OID637879430 
Productputative 3-oxoacyl-ACP synthase III 
Protein accessionYP_481196 
Protein GI86740796 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.125947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTACC TCAGATCGGG GTTCGGTCTC CGAGCGGTCC GAGCGTGGTT GCCCGACGCG 
ACCGTGTCCG CCCGAGACGC GATCGGCCAG GGCCACATCA GCGAACAGGA CCTGGCGAAC
ACCGCCGTCA TCCGGGTACC GGTCGCGCGG GATGTCGCGG CGCCGGAAAT GGCGGTCCGG
GCCGCGCGGG CGGCGCTGTA CGCCGCCGGC TGGGACGGAA GCCGCCTCGG TTTCAGCGCG
CACGCCTGGA TCCATCACCA GGGGCACGAC TTCTGGTCGC CCGCGCACTA CATCGCCGAT
CAGCTCGGTG CCCGCCGCAG CGTCCCGCTG GGCATCCAGG TCATGTGCAA CGGCGGAGGG
GTCGCCCTGG AGGCGGCCTG CGCCCGCCTG CTCGCCGACA GCACGACCGG CGCCGCGCTG
GTGACGACGG CCGACTGTTT CCGCGACGAG GGATTCGACG GCTGGAGCGG TGACTACGGA
GTCTTCTACG GTGACGGCGC GACGGCCATG CTCCTGCACG AGCGGGACGA CGCGGTGGAC
GAGCTGACGC TGCTCGGTCT GGCCAGCGGG GCGGTCTCCG CCGCTGAGGG GCTGCACCGC
GGTCGCGACC CCTTCACCCC GGCGAGCCGG TGGCTCAGCG AGCGAGTGGA CGTGAGGCGG
ACGAAGAAGG CCTTCATGGA GGACGTCGGC ACCGCCGGCT TTTTCCGGGA CGTGCACGCG
ACGCTCCGTC GCATCATCGC GGACTGCCTC GCCGACAGCG GCCTCACCTC CGACGATCCG
CGGCTGCGCC TCATCGCCCT GCCCCGGGTC GGTCTCAAGG TGCGGCAGGA GACCTATCAC
CCGGCCGTTG AGAACGCCAC CACCGCCAAG ATCGTGGACC TCGGCGCGGA GACCGGGCAT
CTGGGCGCGG GCGACATGGG GGCGAACCTC GCCGCGATCG TCGAACAGGA CCTGCTCGCC
CCGGGCGAGT TCGCCCTGGT GATCGGCGCC GGCGGTGGCT TCAGCTTCTC CTGCGCGGCC
GTCGGCCGAC CGGCGGCCTG A
 
Protein sequence
MMYLRSGFGL RAVRAWLPDA TVSARDAIGQ GHISEQDLAN TAVIRVPVAR DVAAPEMAVR 
AARAALYAAG WDGSRLGFSA HAWIHHQGHD FWSPAHYIAD QLGARRSVPL GIQVMCNGGG
VALEAACARL LADSTTGAAL VTTADCFRDE GFDGWSGDYG VFYGDGATAM LLHERDDAVD
ELTLLGLASG AVSAAEGLHR GRDPFTPASR WLSERVDVRR TKKAFMEDVG TAGFFRDVHA
TLRRIIADCL ADSGLTSDDP RLRLIALPRV GLKVRQETYH PAVENATTAK IVDLGAETGH
LGAGDMGANL AAIVEQDLLA PGEFALVIGA GGGFSFSCAA VGRPAA