| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2086 |
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| Symbol | |
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| ID | 3905613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2452317 |
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| End bp | 2453792 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879421 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_481187 |
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| Protein GI | 86740787 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.377299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTACCG TGAGTACGCC CGCAGCGGTA GCGGACGAAT CCGACCGGCT GGATCCGGCG
CTGCGCAGGC TGATCGCCGT GCTGATCATC GGTGCGATGG CGCCGCTGCT GGACACCACG
ATCGTCAACG TCGCGCTGAA CACCATCGTG CACGACCTGC ACACCACGGT CTCCGCCGTC
CAGTGGGTCA GCACGAGCTA CCTGCTCGCC ATGGGGATGT CGATCCCGCT GGCGGGATGG
GCCGTCGCCC GCTTCGGCGG CAGGCAGACC TGGATGATGT CGCTCGTCCT GTTCCTGGTC
GGCTCGGCGC TGGCCGGGGT GGCGTGGAAC ATCGGCAGCC TGATCGCCTT CCGGGTGGTC
CAGGGCACCG CGAGCGGCAT GGTGCTGCCG GTGCTGCAGA CGCTGCTTCT GCAGGCGGCT
GGCGGGCGCC GCACCGGGCG GCTGATGTCC GCGGTGAGCA TGCCCGCCGT GATCGCGCCC
ATACTTGGGC CGGTGCTCGG CGGTCTGATC GTCGGCAACA CCACCTGGCG GTGGATCTTC
CTGATCAACA TTCCCGTCTG CCTGGTCGGT ATGTTGCTCG CCTGGCGGGG TCTCGAACCC
ACCAGCGCGC GGCCCGGTGA CCCTCTGGAC GCGGTGGGCC TGGCCCTGCT CTCGCCCGGC
ATCGCGGGCA TCCTGCTGGC CCTGTCCCAG TTCAGCAGCC GCCGCGAGTT CGGCCTTCCG
GTGATCATCC CGCTCGTTCT CGGGCTGGCG TTGCTCGTCG CGTTCGTCGT GCACGTGCTG
CGCGGGCGCG TCGCCAACCC GATCATCGAC GTCCGGCTCT TCCAGGTGCG TGCCTTCAGC
GCCGCCTGCG CCCTGCTGTT CCTGTCGGGC CTGTCGCTGT TCGGTGGAAC GCTGCTGGTT
CCCCTCTTCC TCCAGCAGGC CCGCGGCTAC TCCGCGCTGT CGGCGGGCCT GCTCCTAGTG
GCTCAGGGGG TGGGGGCGAT GCTCGCCCGG AGCACGGTGG GCAAACTGGC CGACCGCACG
GGCTCGAGAC CTCTTGTGCT GGTCGGCATC GTCCTGATCG CGCTGCCGAT CATCGGCTTC
ACTCAGGTCG GCAGCCACAC CCAGGTGCTG TTCATGGCCG CCTTCCTGCT GGTCTTCGGC
TGCGGTATCA GCACGGTGAG CATCGCGGTG ATGACCTCGG CCTTCCAGGG GCTGGACCGC
GCGCAGGTCC CGCACGCGAG CGGGGCCACC CGAATCGTGC TCCAGGTCGG CGGCTCGTTC
GGCGCGTCGA TCGTCTCGCT CATCCTCGCC CGACAGATCG CCACGCACGG CGGGGGAGGC
CAGACCGGCC TGATCACCGC GTTCAGTCAC ACGTTCTGGT GGGCGGCCGG GTTCGCCCTG
ATAGCGCTGA TCCCCGCGGC GTTCCTCCCT GGGCGCGGGC ATCAGCTCGC GCCGGCCGTC
CCGAAACAGC CGCGGGGGGA GGATGCGCGC CACTGA
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| Protein sequence | MSTVSTPAAV ADESDRLDPA LRRLIAVLII GAMAPLLDTT IVNVALNTIV HDLHTTVSAV
QWVSTSYLLA MGMSIPLAGW AVARFGGRQT WMMSLVLFLV GSALAGVAWN IGSLIAFRVV
QGTASGMVLP VLQTLLLQAA GGRRTGRLMS AVSMPAVIAP ILGPVLGGLI VGNTTWRWIF
LINIPVCLVG MLLAWRGLEP TSARPGDPLD AVGLALLSPG IAGILLALSQ FSSRREFGLP
VIIPLVLGLA LLVAFVVHVL RGRVANPIID VRLFQVRAFS AACALLFLSG LSLFGGTLLV
PLFLQQARGY SALSAGLLLV AQGVGAMLAR STVGKLADRT GSRPLVLVGI VLIALPIIGF
TQVGSHTQVL FMAAFLLVFG CGISTVSIAV MTSAFQGLDR AQVPHASGAT RIVLQVGGSF
GASIVSLILA RQIATHGGGG QTGLITAFSH TFWWAAGFAL IALIPAAFLP GRGHQLAPAV
PKQPRGEDAR H
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