Gene Francci3_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2059 
Symbol 
ID3904632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand+ 
Start bp2423555 
End bp2424106 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID637879395 
Producthypothetical protein 
Protein accessionYP_481161 
Protein GI86740761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00223204 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0587281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCAGG CCGTGGCCGA GATGGTGCGG GTACTGGCCC CTCATGACGA AATCGACTGG 
CACATACCCG CGGGTTCCCT GGAGTGGACC TGCTGGACTA CCGCTGCGCA CGTGGTCCAC 
GACCTCGCGG CTTATGCTGT ACAGCTCACA GCCCAGAGCG ACGAGAAATA CCTGCCCTTT 
GACCTGACAG TTCGGCCGGG CGCGTCGCCG CGACAGATTT TGCGACTGGC TAGGGTGTGC 
GGCTGTCTGC TCGGCGCGGC GGTGTCGGGA GCCGCGCCGG AGGTCCGCTC CTGGCACTGG 
GGGGCCACCG ATCCCAGCGG CTTCGCCGCG CTGGGCGTCT GCGAGACCCT GGTCCACACC 
TACGACATTA CCCAGGGTCT GGAAATCGCG TGGTCGCCTC CCGAGCCGCT GAGCGTCGCC 
ATCCTCGGAC GGCTTTTCCC TGACGCTCCG GAAGGTGACC CGTCCCGGGC ACTGCTGTGG 
TGCACGGGAC GGATTGACCT CCCTGGCCGA CCCCGCGTCA CCTCTTGGGT TCTGAGGACC 
GCCGTCGCCT GA
 
Protein sequence
MQQAVAEMVR VLAPHDEIDW HIPAGSLEWT CWTTAAHVVH DLAAYAVQLT AQSDEKYLPF 
DLTVRPGASP RQILRLARVC GCLLGAAVSG AAPEVRSWHW GATDPSGFAA LGVCETLVHT 
YDITQGLEIA WSPPEPLSVA ILGRLFPDAP EGDPSRALLW CTGRIDLPGR PRVTSWVLRT 
AVA