Gene Francci3_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2044 
Symbol 
ID3904617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2405393 
End bp2405806 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content66% 
IMG OID637879381 
Productthioesterase superfamily protein 
Protein accessionYP_481147 
Protein GI86740747 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACC TGAGCCAGCC GGCGGAATCC GGCCAGCCGG TCCTGTGGAA CACACCGCTG 
GCGCGTAACC TCGGCCTCCC TCCGGTGGAC CGGGCCTCCG ATGGCACCTT CCGTGCGGAG
TTCGACCTTG GTGACCGTTT CATCGGCAAC AAGAGCATCT TCGGAGGCTG GCTCGCCTGC
CTGGTAGACC ACCTCGGAGC CGTGGCGACG CTGGACAGCA TCAGCGATCG GTCCGCCTTC
TCAACCGCCG AGATCACGGT GAAGTTCCTG CGGCCCGTAT TTCCGGGCCG CCTGTGCGCC
CGCACCGCGA TCCAGTCAGC GAACATCCGC ATCGTCGACC TCGCCGTCGA GCTCCGGCAG
GGCGACGAAC TGTGCGTTAC CGCCTCGGTC ACGCAGGCCA TCACGAAGGG ATGA
 
Protein sequence
MHDLSQPAES GQPVLWNTPL ARNLGLPPVD RASDGTFRAE FDLGDRFIGN KSIFGGWLAC 
LVDHLGAVAT LDSISDRSAF STAEITVKFL RPVFPGRLCA RTAIQSANIR IVDLAVELRQ
GDELCVTASV TQAITKG