Gene Francci3_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2030 
Symbol 
ID3906747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2387389 
End bp2388540 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content69% 
IMG OID637879367 
Producthypothetical protein 
Protein accessionYP_481133 
Protein GI86740733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.382188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG TCGGAACAGA CCCGGCCGAC GAGAACCTGC TCGCCTGGTT CCCGCTGGTC 
CAACGCCCCC GACCACCCGG CCTCCCCCTC GAAGACCGAG TCAGACAGCT GCACGACCTG
GCCGCACGGA CATCGGACGG TCTCCCGCTC CTCCGAGCGG CCGAAGTCTG CAACAAGGCG
GCGCTGATCG CCTCCGACTG CGGACAACCA GACCTCGCCC AAGACCTGTG CTGGCGCCAA
CACACGCTGT TCGATCAGGC GCGGCCCCTG CCCGCCTCAG CCGCCGAACT CGCCCTCCAA
CCGGTGCTCA ACCTCCCGCG CCAACTGATC CGCGATGGTG ACGGCAACCG CGCTCACGCG
ATCCTCCAGG CCCTGCACGA GGCCGCGCGC ACGCAGACCA GCGCACTGAT CGACGGACGG
TCCGTCAGTC TCCACAACGT CACCTGCGCC TCCGACGACC ATCGGACCAT GCGCACCCTG
ACCTGGACGG CGCTCCTGGC GGACGGAGTC CGGGCACTGG CACGGGCCGG GCGCTGGCAC
GAAGCCGCCG AACAAGCCGC GGCCCACCGC GGAGTCGGCC GCCGACTGCT CGACGGCCGA
CAGGCGACCG TCCTGGCACT CGCCCAGGCC GGGCACACCG AGCAGGCAGC AGCGCTGGTC
GACCAGAGCG CCACCCCCGA ACCGTGGGAA CAGGCGATCC AAACAATCCT GCGGGTGCAC
TGTCTGCGAC AGGCTGGCGC CGACACCGGC CCGCAGATCG CCCCGCTCCT CGCCACCGCG
CTCACCCTGA TGCGGCAGCC CGACCTCTCG ACCATGGTCT TCCGTGCCCG AGCAGGCATG
ATCGCGCTCG ACCTCGCCGA CGGCCACGAC CATCCGCGCA TCGACGTACT ACGCCGGGCG
CTGATCGCAG GTACGTTCAA GGACGCGTAC ACGGCCCGCG ACACGCTCGC GCACCGCCTC
CGGGAGTCGA TGACGACGAC GCAGCGCCAA ACCCTGGCCG ATGTCTTCCG CGCCGCCGGG
CTCGATGCCG GAAGCATCCC GGAATCGCTG TACGGCGATT TGATGGAGAC GGTGAAGTTC
GCCGAAGATC AGCTACGTGG ATGTCTCGGA CGCCACGCCA GGCACTGCGA GTGCACAACA
GCGACAAGCT GA
 
Protein sequence
MTNVGTDPAD ENLLAWFPLV QRPRPPGLPL EDRVRQLHDL AARTSDGLPL LRAAEVCNKA 
ALIASDCGQP DLAQDLCWRQ HTLFDQARPL PASAAELALQ PVLNLPRQLI RDGDGNRAHA
ILQALHEAAR TQTSALIDGR SVSLHNVTCA SDDHRTMRTL TWTALLADGV RALARAGRWH
EAAEQAAAHR GVGRRLLDGR QATVLALAQA GHTEQAAALV DQSATPEPWE QAIQTILRVH
CLRQAGADTG PQIAPLLATA LTLMRQPDLS TMVFRARAGM IALDLADGHD HPRIDVLRRA
LIAGTFKDAY TARDTLAHRL RESMTTTQRQ TLADVFRAAG LDAGSIPESL YGDLMETVKF
AEDQLRGCLG RHARHCECTT ATS