Gene Francci3_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2019 
Symbol 
ID3906735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2371828 
End bp2372217 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content71% 
IMG OID637879355 
Productputative transcriptional regulator 
Protein accessionYP_481122 
Protein GI86740722 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.837562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGAAGC CCCTGCCCGC CGACATGTTC GACGAGCTGT GCCCGTCCTC GCTCAACCCG 
ATCCGCTTCG GCGACAAGTG GGCAGCGCTC ATCATCCGCT GCCTTGAGGA CGGGCCGCGC
CGGTTCTCCG AGCTGCGCGT GCCGCTGAGC CGGGTCACTC CCAAGGTGCT CACCCAGTCG
CTGCGTTCCC TTGAACGGGA CGGCCTGATC ACCCGCACCG TCCTGGATGC CAGGGCCACC
GCCCATGTCG AGTACGAGCT GACCGCGCTG GGCCGCAGCA TGCTGGAGCC GATGGCGGTC
GCCTGCGCCT GGGTCGCCGA GCACTGGGAC CAGCTCCTCG ACGCCCGCGA GGCGTATGAC
CGCGCCCTCC GCCTCGACCG CGCCGGATGA
 
Protein sequence
MRKPLPADMF DELCPSSLNP IRFGDKWAAL IIRCLEDGPR RFSELRVPLS RVTPKVLTQS 
LRSLERDGLI TRTVLDARAT AHVEYELTAL GRSMLEPMAV ACAWVAEHWD QLLDAREAYD
RALRLDRAG