Gene Francci3_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2018 
Symbol 
ID3906734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2371099 
End bp2371719 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content73% 
IMG OID637879354 
ProductNAD-binding protein, putative 
Protein accessionYP_481121 
Protein GI86740721 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATTG TGGTGTTCGG CGCGGGCGGG CGTGCGGGGC GGCAGGTTCT CGCCGAAGCA 
GGTCGCCGCG GCCACCGGGT CACCGCCGTG ATGCGCGACC CCGCACGTCA TGGCGACCTG
CCGTCCGACG CCCGGGTGGT TGCGGGTGAT GTCACTGATG CGGTAAGTGT CGAGCGTGCG
GCGGCCGGAC AGGACGCGGC GATCAGCGCC GCGGTCGACC TGTCCACGCC GGCGCACGAC
TTCTTCACCG CGTCGTCCCG CGCCTTGGCC ACCGGGCTGG CCAGGGCGGG CGTGCGCCGC
CTGGTGGTCG TCGGCCTCTC CTCGATCCTG CCGGGGGCAT CTGGCGCCGC GTTGATGGAC
GAGCCCGGCT ACCCGAACGA GTACCGTTCC TTCTTCCTCG GCCACGCGGC GGGCCTCGAC
GTGCTGCGCG CCTGCGAACT CGACTGGGTG TACGTCGCTC CCGCTGGGGA CTTCGACCAC
GACGGGGCGC GCACCGGCCG GTACCGGGTC GCCGAGCACG GCGACCCGGC CAGCCGGATC
GGGTACGCGG ACTTCGCGAT CGCGCTGCTC GACGAGATCG AGGAACCGCG CCACCACCGC
GCCACCGTCA GCGTCCAGTA G
 
Protein sequence
MNIVVFGAGG RAGRQVLAEA GRRGHRVTAV MRDPARHGDL PSDARVVAGD VTDAVSVERA 
AAGQDAAISA AVDLSTPAHD FFTASSRALA TGLARAGVRR LVVVGLSSIL PGASGAALMD
EPGYPNEYRS FFLGHAAGLD VLRACELDWV YVAPAGDFDH DGARTGRYRV AEHGDPASRI
GYADFAIALL DEIEEPRHHR ATVSVQ