| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2014 |
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| Symbol | |
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| ID | 3906730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2365197 |
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| End bp | 2366768 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637879350 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_481117 |
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| Protein GI | 86740717 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.646267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGACC AACCCAACGC GGCCTCGCCG CCCGCCACCG CCGCGCCCGG GCCCGCCTCG
GCCGCCAAGC TGGACCCGGC GCTGATCCGA CTGTCCGCCA CAGTGATGCT CGGCGCGATC
ATGGTGATCC TCGACACGAC GATCGTCTCG GTCGCCATCC ACGCGCTCGG TAACGAGTTC
CACACGTCGC TGTCCACGAT CTCCTGGGTC ACCACCGGTT ATCTGCTGGC GCTGGCCGTC
GTGATCCCGC TGGCCGGCTG GTCGGTCGAG CGGTTCGGCG CGACGCGGAT GTGGAACATC
TCGCTGGCGC TGTTCGTCGC CGGCAGTGCC CTGTGCGGCC TCGCCTGGTC GGCAGGGACG
CTGATCGCCT TCCGGGTCCT GCAGGGCCTC GGCGGCGGCA TGATCATGCC GATCTGCATG
ACCCTGCTCG CCCAGGCCGC GGGCCCGCAG CGGATCGGCC GGGTCATGAG CATCATCGGC
GTCCCGATGC TCATCGCGCC GGTGCTCGGC CCGGTCATCG GCGGACTGAT CGTCGACCAC
CTCAGCTGGC GCTGGATCTT CTACGTGAAC GTGCCGATCG GCGTGCTCGC CCTGTTCCTG
TCCTGGCGGG TGCTGCCACG CGATGACCGC GGCTCGGCGC ACCACCGGCT CGACCTGCCC
GGCCTGGCGC TGATCTCGCC GGGGCTGGCG GCGCTCGTCT ACGGCCTGTC CGAGGCGGGC
AACGGCGGCG GCTTCGGGGC TGCGAAGGTG CAGGTCAGCA TCGCCGTCGG CGTAGTGCTG
CTGGCCGGCT TCGTCGTGCA CGCCCTGCGC CGCGACGGCG CCCTGCTCGA CATGCGGCTG
TTCGGCGACC GGGTGTTCAG CATCGCGAGC GTCACGACCT TCGTGATCGG CGCCATGCTG
TTCGGTGCGA TGTTCCTGCT TCCGCTCTAC TACCAGGTCG CGCGCGGGCA GAGCGCCAGT
GACGCCGGCC TGCTCATGGC GCCACAGGGA CTGGGCGCAA TGATCTCCAT GGCGATCGCG
GGACGGGTCT CCGACCGCCG CGGCGCCCGG TCGGTCGTCC CGCTCGGCAT GGTCCTCGCC
CTGCTCGGCA CGCTGCTGTT CACCCAGGTC GACGCGCACA CCAATGAGGT GCTGCTGGCG
TTCTCGCTGT TCGTGCGCGG TCTGGGCTTC GGGGCGACGA TGATGCCCGC GATGGGCGCC
GCCTATGCGA CGCTCGGGCA GGCGGCGGTG CCGCGCGCGA CCACGACGCT GAACATCCTG
CAGCGGGTCG GCGGGTCGCT GGCCACCGCG CTGGTCGCCG TCGAACTGCA GCACGCCATC
GCCAGCCGGC TGCCGGGCGT CGGTGGCGAG GGTGCGCTCG CCGAGTCGGC GGGGGTGAAG
CTTCCCGGCC CTGTCGCCGA CAAGGTCGCC GAGGCGTTCG GCGTGACGTT CTGGTGGGTC
GTCGCCCTGA CCGCCGTCGG CTTCGTCGCC AGCCTCTTCC TCCCCGGCCG CCCCGCTGCC
ACCGTGGCGC ACGGCCCCGC GAACGCCCAG CCGGCGGCCC CGCAGCGCGA ACCGGTAGCG
GTGGTGGAGT AG
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| Protein sequence | MPDQPNAASP PATAAPGPAS AAKLDPALIR LSATVMLGAI MVILDTTIVS VAIHALGNEF
HTSLSTISWV TTGYLLALAV VIPLAGWSVE RFGATRMWNI SLALFVAGSA LCGLAWSAGT
LIAFRVLQGL GGGMIMPICM TLLAQAAGPQ RIGRVMSIIG VPMLIAPVLG PVIGGLIVDH
LSWRWIFYVN VPIGVLALFL SWRVLPRDDR GSAHHRLDLP GLALISPGLA ALVYGLSEAG
NGGGFGAAKV QVSIAVGVVL LAGFVVHALR RDGALLDMRL FGDRVFSIAS VTTFVIGAML
FGAMFLLPLY YQVARGQSAS DAGLLMAPQG LGAMISMAIA GRVSDRRGAR SVVPLGMVLA
LLGTLLFTQV DAHTNEVLLA FSLFVRGLGF GATMMPAMGA AYATLGQAAV PRATTTLNIL
QRVGGSLATA LVAVELQHAI ASRLPGVGGE GALAESAGVK LPGPVADKVA EAFGVTFWWV
VALTAVGFVA SLFLPGRPAA TVAHGPANAQ PAAPQREPVA VVE
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