Gene Francci3_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2003 
Symbol 
ID3906719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2352574 
End bp2353125 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content69% 
IMG OID637879339 
Producthypothetical protein 
Protein accessionYP_481106 
Protein GI86740706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.415801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTCA TGGAGCCTGA GTCGCAGGAG GCTCCGGCCG GGTCACCGCA GGCGCGGGAC 
CCGGCGCCGC GTCCGTCGCG GCGGGTGTTC AGCACGGCGT ACAAGCTGCG GATCGTCGCG
GAGTACGAGA ACGCCCCGCA CGGCGAGAAG GGTGCGATCC TGCGCCGGGA GGGTTTGTTC
TCCTCGCATG TGGTGGAGCG GACCCGGGCA CGTGACGCGG GGGCGCTGGG AAGAGCAGGC
GTCCCGGCCC GCGCTCCGGG GAAGAATCCG GGGAAGTCGG CGGAACAGAT CGAGTTGGAG
CGTCTGCGCC GCGAGAACGA ACGGTTGAAA GCGAAACTTG CGACGGCAGA AACCGCGCTG
GCTTTTATGG GAAAAGCACG CGCTCTCTCT TGCGGCAGGT CTCCGAGAGA GCGGACTCCG
AGTACCGGAT CGTCCGGGCG GCGGGGCAGA CCAGGGAACG CCGTGCGCAG GCGACCCACC
CGCCGCGGGT CCGCCCCGAG CTGTCCGCGA CCGGACCGTC ACAGGTCTGG TCGCGGGATA
TCACCGCGTT GA
 
Protein sequence
MMFMEPESQE APAGSPQARD PAPRPSRRVF STAYKLRIVA EYENAPHGEK GAILRREGLF 
SSHVVERTRA RDAGALGRAG VPARAPGKNP GKSAEQIELE RLRRENERLK AKLATAETAL
AFMGKARALS CGRSPRERTP STGSSGRRGR PGNAVRRRPT RRGSAPSCPR PDRHRSGRGI
SPR