Gene Francci3_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1982 
Symbol 
ID3903690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2327451 
End bp2327996 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content75% 
IMG OID637879318 
Productdiacylglycerol O-acyltransferase 
Protein accessionYP_481085 
Protein GI86740685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.157931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.727721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCTTG ACCTGCCGCT CGACCCGATG CCAGTGTCCT GGCGGTTGCG GGCGATTACC 
GCCGGTGGCC GGCGGGCGCG GCGCCCGGGG CGGATCCTCG CGGCCGGCGC GGCCCTGCGG
GTGATAGGTG CCCTGCCGGC GCCGCTGCGC GGACCCGCGG CTCGCAGCGT CTATCAGGGT
CGGCATATTG GAATGATCAT ATCGAACCTT CCAGGCGCGG CGGGCCCGCG GGAGTTCGTC
GGCCTGCCAC TGCTCGACAC CTACCCGCTG GTCCCCCTCG CCGAAGGCGT GCCGCTTGCG
GTGGGGGCAC TCGGCTGGCA GGACGAACTC TGCCTCTCGG TGACGACGGA TCCCAGCCTT
GTGCCGCCGA CGGCGGACCT GGCCGGGCGG CTGTCCGCCG GGCTGGACCA GCTGCGTCGC
GAGGTGAGCG CCCCGGCGCG CGCCCCTGGG ACGGGGTCCG CCTCGGCCGG CTACCAGGGG
CGCCCAATCT CGATCGAGTG GGCTGGCCGC GGCTGGCGTC GCCCGGGCGA TGCCGGTGAC
CCGTAA
 
Protein sequence
MQLDLPLDPM PVSWRLRAIT AGGRRARRPG RILAAGAALR VIGALPAPLR GPAARSVYQG 
RHIGMIISNL PGAAGPREFV GLPLLDTYPL VPLAEGVPLA VGALGWQDEL CLSVTTDPSL
VPPTADLAGR LSAGLDQLRR EVSAPARAPG TGSASAGYQG RPISIEWAGR GWRRPGDAGD
P