| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1978 |
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| Symbol | |
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| ID | 3903686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2322036 |
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| End bp | 2324816 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879314 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_481081 |
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| Protein GI | 86740681 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.690285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGAC CAGACGACGT CCGGGATTCC GACATCGCTA TTATCGGGAT GGCGTGCCGT
TTTCCCGGGG CCGATACCGT CGAGGAATTC TGGCAGAATC TGTGTGACGG GCGTGAGACC
ACCACCTTCT TCACCGAGGC CGAACTGCTG GCAGCCGGCG TCGGCCCCGC ACTCGTGGCG
GACCCGCGCT ATGTGCGGGC CGGGCAGATA CTGGCCGACA TCGAGATGTT CGACGCCGAG
GTCTTCGGGA TCACGAGCGA GGAGGCGGAG CTCCTGGACC CACAGCAACG GCACTTCCTC
GAATGCGCGC TCACGGCGCT TGAGAACGCC GGTTACAACC CGGACACCTG CCCCGGACCG
ATCGGTATCT ATGCCGGCGC CGGGCTGAAC ACCTACCTTC TACGCAACCT CTCCGGCCGT
TTCCGCCACG GGTCGACGCT GGAACGTTAC CGGCTGATGA TAGGCAACGA CAAGGACTTC
CTGGCGACGC GCGTGGCCTA CAAGCTGAAC CTGCGGGGCC CGGCGGTGAA CGTGAACACC
GCCTGCTCCA CTTCGCTGGT GGCCGTCAAT CTGGCCTGCC TGAGCCTGCT GGGCGGAGAG
TGCGATCTTG CGTTGGCCGG AGCGGCCCAT ATCAAGGTGC CACAGGCCGA GGGCTACCTT
TTCCAGGAGG GAATGATCCT GTCGCCGGAC GGCCGGTGCC GGGCTTTCGA CGCCCGAGCG
CAGGGCACGA TCCTCGGCAG CGGTGTCGGC ATCGTGGTCC TGAAGCGGTT GGCCGACGCG
CTCGCCGACG GCGACTGGAT TCACGCGGTC ATCAAGGGAA GCGCGGTCAA CAACGACGGC
GGCGCGAAGA CCGGCTACAC GGCTCCCAGC GTGCAGGGCC AGGCCGCCGT GATCGCCGAG
GCTCAGGCTC TTGCCGGTTG CGCCGCCGAG ACGATCACCT ATGTCGAGGC CCACGGTACC
GGCACCCCGC TCGGGGACCC GGTCGAGCTC GCCGCCCTGA CCGACGTGTT CCTGCGGCAG
GACGTGTTCC TGCGGCAGAC AGGGGCAGGC GCCCGGTGCG CCATCGGTTC GGTCAAGACC
AACATCGGCC ACCTGGACGC GGCGTCCGGG ATCGCCGGAC TGATCAAAAC CTCGCTGATG
CTGCGACACC GGCGGATCGT GCCGAGCCTG CACTTCGAAA AACCCAATCC CGACATCGAC
TTCGACGCCA ATCCCTTCCG CGTCGCCACG GAGTCCCAGG AGTGGCCGGC ATCGGGCACA
GCCCCGCGAC GTGCCGGCGT GAGCTCGTTC GGCATTGGCG GCACGAACGC CCATGTGATT
CTTGAGGAGC CGCCGCCCCG CGAACGCGAG CCCGGGGTGC CGCCTTCGGA CGGCTGGCAG
TTGCTGATGA TCTCTGCCGG CTCGGTCGCG GCGCTCGAGG AGGCAACGGA GAATCTGGCG
CGTCATCTGC GCGTGCACCG CGAGACGCTC GACCTCGCCG ACGTGGCGTA CACGCTCGCG
GTGGGACGCC GGGCACGTGC GTACCGACGG GCGCTGGTGT GCCGGGACGT CCACGACGCC
GCACTGACGC TCGCGCTCGG GGAGCCCGAC CGCGTGTCCA CCGGGCAGGT TGCCGACGGC
GAGGCCGACG TAGTCTTCGT TTTCGCGCAC CGTCTTATGG AGAACGGCGA CGACACCCCT
CTCGCCGGCC TGTACCGCGA CGCCGCCGTA TACCGCGACG TCGCTGTGTT CCGCGACGCG
GTCGACCGGT GCGCGGTGGC CCTCAAGACT CTCGGGGTGA GGCCGCGGAC ACCCGACCCG
GCGTCGTTGT TGCGTGCGCG GCATGGCGAC GCCGTCGCCG CCTTCGTCGG GCAGTACGCT
CTCGCCGAGC TCTGGACGGC ATGTGGTGTG CGTCCGAGCG CGCTGGTGGG GTTCGGCTCG
GGCGATCTGG TCGCCGCCTG CCTCGCCGGG ATCTTCCCCC TCGAGTCCGC GCTCGGGCTG
GCCTGGGCGC AGGCGCACGG CGAGCCGGCC GGCAACCTCA CGCCAGCGGC CCCCCGGTAC
CCCGTGTGGT CCGCGGCAGT CAACGGTTGG CTGGACGTGG GTGCGCCGGT GCCGTCGGCG
GGCTGGGTCG GGCCGCGTGA CGAGACTCCC GACGCCGAGG AACGTCTCGC CCTCCTGCTC
GACGGTCGGC GCGAGACATC ATCCGGGCGG AAGGTTGTGC CATTGGAGAT GGACCCGCGC
GGCACCCGTC CCGACGACGG CACCCGTCCC GACGACGACG CCCGACACGT GTGGCTGGCG
ACCGCGGGGC GCCTGTGGAC AAGCGGCGTC AGCCTCGACT GGTCGGCGTT GCATGCTGGC
CAGGGACATC GGCGCGTGCC CCTGCCGACC TACCCGTTCC AGCGCAGGCG CTACTGGGTC
GAGGCGGACG AGCACGCGTT TCCGGCGACT GCCGGAGGAA CCGATGCCGG CCCCGCGCCG
GCGGAGGGGA CGCTGCGCGA CCGAGTGGAG ACGGCACGGG ACGCCGAGAG ACCCGCACTT
GTCATCGATT TCATCCAACA TCAGGTCGCG GAAATGCTCG GACTGGACGA TGCGGCACAG
GTGGACCCGG ATCAGAACCT CTTCACGCTG GGGCTGGACT CGCTGAATCT GATCGAGATC
GCGGCACGGC TGGGTGCCGA GCTGGAGCAG GACGTCCGGG CCTCGGTCTT CACCGATCAT
CCGACTATCC GCGCCTACGT GGAAAAGCTG GCGGCATCGC AGGACCTGCC CGGCACCGGC
CCAGGCACCC TGACGGGGTA G
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| Protein sequence | MERPDDVRDS DIAIIGMACR FPGADTVEEF WQNLCDGRET TTFFTEAELL AAGVGPALVA
DPRYVRAGQI LADIEMFDAE VFGITSEEAE LLDPQQRHFL ECALTALENA GYNPDTCPGP
IGIYAGAGLN TYLLRNLSGR FRHGSTLERY RLMIGNDKDF LATRVAYKLN LRGPAVNVNT
ACSTSLVAVN LACLSLLGGE CDLALAGAAH IKVPQAEGYL FQEGMILSPD GRCRAFDARA
QGTILGSGVG IVVLKRLADA LADGDWIHAV IKGSAVNNDG GAKTGYTAPS VQGQAAVIAE
AQALAGCAAE TITYVEAHGT GTPLGDPVEL AALTDVFLRQ DVFLRQTGAG ARCAIGSVKT
NIGHLDAASG IAGLIKTSLM LRHRRIVPSL HFEKPNPDID FDANPFRVAT ESQEWPASGT
APRRAGVSSF GIGGTNAHVI LEEPPPRERE PGVPPSDGWQ LLMISAGSVA ALEEATENLA
RHLRVHRETL DLADVAYTLA VGRRARAYRR ALVCRDVHDA ALTLALGEPD RVSTGQVADG
EADVVFVFAH RLMENGDDTP LAGLYRDAAV YRDVAVFRDA VDRCAVALKT LGVRPRTPDP
ASLLRARHGD AVAAFVGQYA LAELWTACGV RPSALVGFGS GDLVAACLAG IFPLESALGL
AWAQAHGEPA GNLTPAAPRY PVWSAAVNGW LDVGAPVPSA GWVGPRDETP DAEERLALLL
DGRRETSSGR KVVPLEMDPR GTRPDDGTRP DDDARHVWLA TAGRLWTSGV SLDWSALHAG
QGHRRVPLPT YPFQRRRYWV EADEHAFPAT AGGTDAGPAP AEGTLRDRVE TARDAERPAL
VIDFIQHQVA EMLGLDDAAQ VDPDQNLFTL GLDSLNLIEI AARLGAELEQ DVRASVFTDH
PTIRAYVEKL AASQDLPGTG PGTLTG
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