| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1948 |
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| Symbol | |
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| ID | 3904310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2288912 |
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| End bp | 2289991 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879285 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_481052 |
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| Protein GI | 86740652 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.968187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGATG AGGCCGCGAC GGCGGTGGAT CCGGCCGCGT GGACCTGCCC GGCGCCGTTG
GTGGAGTGCC CCACGATCGT GATGGGGCAT GGCGGCGGGG GGGCGATGTC GGCCGAACTC
GTCGAGCATC TCTTCCTGCC GGCCTTCGCA GCCGCCGGCG CGGGCGGTCC GGAGGACCTG
GGGGATGCGG CCGTGGTCAC CGTCGACGGC GCACGGGTGT CGTTCACCAC CGACTCCTAC
GTCGTTCGAC CGTTGTTCTT CCCTGGCGGC TCGATCGGTG ATCTTGCGGT CAACGGAACC
GTCAACGACC TGGCGATGTC CGGCGCCGAA CCCCGGTACC TCTCGACCGC ATTCATCCTG
GAAGAGGGCA CCGAGCTGAC CGATCTCGGC CGGGTGGCGG ATGCGCTCGG AGCGGCGGCC
CGTGCCGCGG GCGTCCGGCT GGTCACCGGC GACACCAAGG TCGTCGATGC CGGTCACGGT
GATGGGGTCT ACGTCAACAC GGCGGGGATC GGCCTGGTTC CCGACGGCGT TGACATCCGG
CCCGCTCGGG CCCGGCCGGG CGACGTCGTC CTGGTCAGCG GCGAGATCGG GCTGCACGGG
ATCGCCGTGC TCAGCTGCCG GGAGGGCCTG GAATTCGCCA CGGAGGTCCG CAGTGACACC
GCACCGTTGC ACGGACTGGT CGGCGCCATG TTGCGCACCG GCGCGGACGT GCACGCCCTG
CGGGACCCGA CGCGCGGAGG ACTGGCCGCG ACACTCAACG AGATTGCGCG GACCGCGCGG
GTGGGAATCG TCATCACCGA ACGGCATGTT CCCGTTCCCG AGCCGGTCCT CGACGCCTGC
AGCATTCTCG GGCTGGACCC CTTCTACATC GCCAACGAGG GCAAGCTCGT GGCGATGGTC
GCGCCGCGGG ACGCCGATCG GGTGCTCGAG GCGATGCGCG CGCGCCCACT CGGCCGAAAC
GCGGCTGTGA TAGGTACGGT GACCGCGGAA CACCCGGGAA TGGTGGTCGC GAGGACCGGT
CTCGGCGCGA GCCGCCTGGT GGACCTCCCG GTCGGTGAGC AACTTCCCCG AATCTGCTGA
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| Protein sequence | MVDEAATAVD PAAWTCPAPL VECPTIVMGH GGGGAMSAEL VEHLFLPAFA AAGAGGPEDL
GDAAVVTVDG ARVSFTTDSY VVRPLFFPGG SIGDLAVNGT VNDLAMSGAE PRYLSTAFIL
EEGTELTDLG RVADALGAAA RAAGVRLVTG DTKVVDAGHG DGVYVNTAGI GLVPDGVDIR
PARARPGDVV LVSGEIGLHG IAVLSCREGL EFATEVRSDT APLHGLVGAM LRTGADVHAL
RDPTRGGLAA TLNEIARTAR VGIVITERHV PVPEPVLDAC SILGLDPFYI ANEGKLVAMV
APRDADRVLE AMRARPLGRN AAVIGTVTAE HPGMVVARTG LGASRLVDLP VGEQLPRIC
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