| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1947 |
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| Symbol | |
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| ID | 3904309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2287714 |
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| End bp | 2288922 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879284 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_481051 |
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| Protein GI | 86740651 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGTATC TGGAGGAGTT CCGGGATCCG GAGCTGGCCG GTCGGCTGCT GGAACAGATC
CACGCGACGA CGACTCGCCC ATGGTCGATC ATGGAGGTCT GCGGTGGGCA GACTCACTCG
CTCATCCGGC ACGGTATCGA TCAGCTTCTG CCCGAGGGCA TCGAGATGAT CCACGGCCCC
GGCTGCCCGG TGTGCGTGAC CCCGCTTGAG ATCATCGACA GGGCGCTGGA GATCGCCGCA
CGGCCGGGCG TCATCTTCTG CTCCTTCGGC GACATGCTGC GGGTGCCGGG GAGCGATCGG
GACCTCTTCC GGGTGAAGAG CGCGGGCGCC GACGTCCGGG TGGTCTACTC CCCGCTGGAC
GCCCTGACGA TCGCCCAGCG CAACCCCGAT CGGGAGGTCG TGTTCTTCGG GATCGGATTC
GAGACCACCG CGCCGGCCAA CGCGATGACG GTCTTCCAGG CGAAACGGCT CGACTTGGGC
AACTTCTCCC TGCTGGTGTC GCACGTGCTG GTACCGCCGG CGATTGCCGC GATCATGGAG
TCGCCGAGCT GCCGCGTCCA GGGGTTCCTG GCCGCTGGTC ACGTCTGCAG CGTGATGGGC
ACCGGCGAGT ACCCGGCCCT GGCACGGCGT TACGGCGTGC CGATCGTGGT CACCGGCTTC
GAACCACTCG ACCTCCTCGA GGGCATCCGC CGCACCGTGG TGCAGCTGGA GGCCGGCCGA
CACGAGGTGG AGAACGCCTA TCCCCGAGCG GTTCCGGCAG CCGGCAACCC GGCCGCCATC
GCGATGCTGC GGGATGTTTT CGAGGTGGCC GACCGGGCCT GGCGGGGCAT CGGTGTCATC
CCGGGCAGCG GCTGGCGCCT GTCGCCGGCC TACCGCGACT TCGACGCGGA GCTGCGGTTT
GCCGTCGCGG ATGTCCACAC GGCCGAGTCG TCGGCGTGCC GATCGGGCGA GGTGCTCCAA
GGCCTGATCA AGCCGCATGA GTGCGCGGCC TTCGGACGGC AGTGCACTCC GCGGACCCCG
CTCGGCGCGA CCATGGTGTC CTCCGAAGGG GCCTGTGCCG CCTACTACCT CTACCGCCGG
ATGAGCACCT CCCCGGCGAT TGCGCAGCCC CTGCCGGAAG CGGGACGTGC GCCGGAAGCG
GGACATGTGC TGGAGGTGGG ACGTGCGCTG GAGGTGGGAC GTGCGCTGGA GGTGGGACAT
GGTGGATGA
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| Protein sequence | MRYLEEFRDP ELAGRLLEQI HATTTRPWSI MEVCGGQTHS LIRHGIDQLL PEGIEMIHGP
GCPVCVTPLE IIDRALEIAA RPGVIFCSFG DMLRVPGSDR DLFRVKSAGA DVRVVYSPLD
ALTIAQRNPD REVVFFGIGF ETTAPANAMT VFQAKRLDLG NFSLLVSHVL VPPAIAAIME
SPSCRVQGFL AAGHVCSVMG TGEYPALARR YGVPIVVTGF EPLDLLEGIR RTVVQLEAGR
HEVENAYPRA VPAAGNPAAI AMLRDVFEVA DRAWRGIGVI PGSGWRLSPA YRDFDAELRF
AVADVHTAES SACRSGEVLQ GLIKPHECAA FGRQCTPRTP LGATMVSSEG ACAAYYLYRR
MSTSPAIAQP LPEAGRAPEA GHVLEVGRAL EVGRALEVGH GG
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