Gene Francci3_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1946 
Symbol 
ID3904308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2287415 
End bp2287717 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content70% 
IMG OID637879283 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_481050 
Protein GI86740650 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTCTCG CGGTTCCAGG ACGGGTGGTG GGGATCGAGG AACGCCACGG GGCCCGGATG 
GCCGAGGTCG ATTTCGGGGG TGTGCGCAAG GACGTCTGCC TGCAGTACCT GCCCGAGGTC
ATGGTCGGCG AGTACGTGAT CGTGCATGTG GGGTTCGCGA TCCAACGGCT GGACGAACGC
TCGGCGGTGG AGTCGCTGGC CACCTTCGCG CGGATGGGAC TCCTGACCGA GGAGCTGGGT
GACGGTGCGG CCGGTGTGAG TGCCACGGCC CGCGGGGCCG GCGAGGAGGG GGTGACGCGG
TGA
 
Protein sequence
MCLAVPGRVV GIEERHGARM AEVDFGGVRK DVCLQYLPEV MVGEYVIVHV GFAIQRLDER 
SAVESLATFA RMGLLTEELG DGAAGVSATA RGAGEEGVTR