| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1941 |
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| Symbol | |
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| ID | 3904303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2280341 |
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| End bp | 2281405 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637879278 |
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| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
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| Protein accession | YP_481045 |
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| Protein GI | 86740645 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCA CGAACCCGCA GTCCGGGAGC TCGCGACGCG GCGGTTTCGA CGAGGTGCAC
ATCCTCTGGA TCTCCGAGGG GATGAGCTGC GACGGCGACA CGGTGTCGGT GACCGCGGCC
TCCCAGCCAG CGATCGAGGA TGTCGTCACC GGGCTCGTGC CGGGGTTGCC GACGGTCCAT
CTGCATAACA AGGTGCTGTC GCCGACCGTC GGCGGGGAGG AGTTCCTGGC CCCGTACCGA
GCCGCGGCCC GCGGTGACAT CGAGCCGTTC ATCCTCGTCA TCGAGGGCTC GATTCCGAAC
GAGAACATCC ACGGCGACGG GTACTGGACG TCGTTCGGGA ACGATCCGGA CACCGGCCAG
CCGCTGACCC TGAACTGGTG GATCGACCGG CTGGCACCCA GGGCGTGGGC GGTCGTCGCG
ATCGGCACCT GCGCCGCGTA CGGCGGGATC CACGCGATGG CCGGCAACCC GACCGGGTCG
ATGGGCCTTG CCGACTACCT GGGCCATGAC TTCACCTCCG CCGGCAACCT GCCGATTGTC
AACGTCCCCG GCTGCCCGGT TCAACCGGAC GACTTCATGG AGACGCTGAC CTGGGTGCTT
TACCACGCGG CGGGCACGGC ACCGCCGCCA CCGCTGGACG ACCAACTCCG ACCCCAGTGG
ATCTTCGGTC GGACCGTGCA CGAGGGCTGT GACCGGGCGG GCTACTACGA ACAGGCCGAT
TTCGCGAAGG ACTACAACTC GCCGAAGTGT CAGGTGAAGA TTGGCTGCTG GGGTCCGGTG
GTGAACTGCA ACGTGCCCAA GCGCGGGTGG ATGGGCGGGC TGGGCGGCTG CCCGAACGTG
GGCGGCATCT GCATTGCCTG CACGATGCCG GGATTCCCGG ACAAGTTCAT GCCGTTCATG
GACATGCCGC CGGGAGGGAG CCTGTCCTCG CGCGCGATCA AACCCTACGG GTCGTTCATC
CGCAGGCTGC GTGGCATCAC CAATGCGACG GCGAACACCG AGCCGAAGTG GCGGCACAAC
CGGGAGCTGC TGACCACCGG CTACGACCCG CATTACCGCC CCTAG
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| Protein sequence | MTATNPQSGS SRRGGFDEVH ILWISEGMSC DGDTVSVTAA SQPAIEDVVT GLVPGLPTVH
LHNKVLSPTV GGEEFLAPYR AAARGDIEPF ILVIEGSIPN ENIHGDGYWT SFGNDPDTGQ
PLTLNWWIDR LAPRAWAVVA IGTCAAYGGI HAMAGNPTGS MGLADYLGHD FTSAGNLPIV
NVPGCPVQPD DFMETLTWVL YHAAGTAPPP PLDDQLRPQW IFGRTVHEGC DRAGYYEQAD
FAKDYNSPKC QVKIGCWGPV VNCNVPKRGW MGGLGGCPNV GGICIACTMP GFPDKFMPFM
DMPPGGSLSS RAIKPYGSFI RRLRGITNAT ANTEPKWRHN RELLTTGYDP HYRP
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