| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1940 |
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| Symbol | |
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| ID | 3904302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2279739 |
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| End bp | 2280344 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637879277 |
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| Product | peptidase M52, hydrogen uptake protein |
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| Protein accession | YP_481044 |
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| Protein GI | 86740644 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGGGC CGGCGCCCAC CCGCGTGGGT CCGCCCGCGG GTTCCTCCGC GGGTCCACCG
CGCGTCCTCG TCGCCGGGAT CGGCAACGTG TTCCTCGGCG ACGACGGATT CGGGGTGGAG
GTTGTGCGCC GCATCGACCC GGCGGACCTG CCGGCCGGGG TGGACGTCGT CGACTACGGG
ATCCGCGGCG TGCATCTCGC CTATGAGCTC CTCGACGGCC GGTACGACGT GGTGATCCTC
GTCGACGCGG TCCCGTCGAC CGATCCACCG GGGACTCTCG TGGTGCTCCG GCCCGAACTT
GACGGGGCCG GCGTCAACGA CATTCCCGTT GACGACATCC CCCCCGTCGA TGACATCCCC
CTCATGGACG CCCATGGCAT GTCTCCCGAC GTGGTCCTGC GGTTGCTGCG GGGCCTCGGT
GGCGATGTCG GCCGAGTGCT GGTCGTCGGC TGCCGACCCG CCGTCGTCGA GGAGCGGATG
GGACTGTCCC GCGCCGCGGG GGCTGCCGTC GGCGACGCGG TGCGGCTCAT CGCGCAGATC
GTCCGAGACC CCGGCTCGTG GGGTCCATCC CCAGCATCCG CCAGTAGGAG GGAGGGGCCG
AGATGA
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| Protein sequence | MIGPAPTRVG PPAGSSAGPP RVLVAGIGNV FLGDDGFGVE VVRRIDPADL PAGVDVVDYG
IRGVHLAYEL LDGRYDVVIL VDAVPSTDPP GTLVVLRPEL DGAGVNDIPV DDIPPVDDIP
LMDAHGMSPD VVLRLLRGLG GDVGRVLVVG CRPAVVEERM GLSRAAGAAV GDAVRLIAQI
VRDPGSWGPS PASASRREGP R
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