| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1938 |
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| Symbol | |
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| ID | 3904300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2277083 |
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| End bp | 2277934 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879275 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_481042 |
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| Protein GI | 86740642 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.1209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGAA CCTGCGGGTG TGACGACGTC GCGGCGCCGC CCCGGCTGAC CTCCCTCGAC
GGGGTCGACC CCGTCGACCC CGTCCTCGTC GGTCCCGGCC CGGCGCTTGC CGGCCACGCG
CCTGACGGGG GGACCACGTC GCGCACCGTG GTTGTCGAGG AGCGGATGCT GGCCAGGAAC
GACATGCTCG CCGAGGCGAA CCGCCGCCGC CTGCTCGCCC GTGACGTGCT GGCGATCAAC
CTGATGGGCT CGCCGGGATC GGGCAAGACG ACGCTGCTGG AGCGGACCGT CCGCGAGTTC
GGCGTGGGCG TGCCGATCGC GGTGGTTGAA GGTGATCAGG AGAGTATCCG CGACGCCGAG
CGCATCCGGT CCACGGGCGC TCCCGTCGTC CAGATCAACA CCGGCCGTGG CTGCCACCTC
GATGCGGCCA TGATCGACTG TGCGCTGCGT GAGCTCGAAC CAGCAGAGGA TTCGATGGTG
TTCATCGAGA ACGTCGGCAA TCTGGTCTGC CCGGCGCTGT TCGACCTGGG CGAGCGAGCC
CGGGTGGTGC TGATGTCCGT CACCGAAGGC GAGGACAAGC CGACCAAGTA TCCGCACATG
TTCGCGGCTG CCGATCTCGT CCTGCTCACC AAGTGCGACC TGCTGCCCTA CCTCGACGTT
GAGGTCGCGC GGTACGAGGC GCAGGTTCAC CGGATCAATC CCCGGGTCGA CGTACTGCGC
GTCCGCGCGA CCCCGGGATC GGGGCCGGGT CTGAGGCCGG GGCCTGGCCT GGGCCAGTGG
TACGCCTGGC TGCGCGCCGA GCGGGGTGCC GGCCACCGCC CGCGGTCGAG CGGGCCGTCT
CACGGTGTTT GA
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| Protein sequence | MCGTCGCDDV AAPPRLTSLD GVDPVDPVLV GPGPALAGHA PDGGTTSRTV VVEERMLARN
DMLAEANRRR LLARDVLAIN LMGSPGSGKT TLLERTVREF GVGVPIAVVE GDQESIRDAE
RIRSTGAPVV QINTGRGCHL DAAMIDCALR ELEPAEDSMV FIENVGNLVC PALFDLGERA
RVVLMSVTEG EDKPTKYPHM FAAADLVLLT KCDLLPYLDV EVARYEAQVH RINPRVDVLR
VRATPGSGPG LRPGPGLGQW YAWLRAERGA GHRPRSSGPS HGV
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