Gene Francci3_1937 details

Gene Information

• Locus tag: Francci3_1937
• ID: 3904299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Frankia sp. CcI3
• Kingdom: Bacteria
• Replicon accession: NC_007777
• Strand: +
• Start bp: 2276721
• End bp: 2277131
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637879274
• Product: hydrogenase expression/synthesis, HypA
• Protein accession: YP_481041
• Protein GI: 86740641
• COG category: [R] General function prediction only
• COG ID: [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
• TIGRFAM ID: [TIGR00100] hydrogenase nickel insertion protein HypA

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0949511
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCACGAGC TGGCGATCAC CCAGAACGTC GTGGACACGA TCGTGGAACG GATCGGGGCA 
GCGCGGGCCA CGGCGGTTCA CCTGGTCATC GGGCGGGTGT CCGGCGTCGT GCCCGACTCC 
GTCCGATTCT GTTTCGACCT GGTGGCAGCG GGCACGCCGG TCGAAGGCGC TCGCCTGGAG 
ATCGACGAAC CGCCGGGCCG TGCCCGTTGC CGGCGGTGCG GCGCCACGTT CGAGGCCGAC 
GATCGCCTGC TCCTGGTGCT CTGCCCGTGC GGCAGCGCCG ACGTCGAGGT GGTCGGTGGC 
GACGAGCTGA TGATCGTTAC GGTCGAGGTG ACACCCGTGC CGAGCGGCGG AGGTGATGTG 
GGATGTGTGG AACCTGCGGG TGTGACGACG TCGCGGCGCC GCCCCGGCTG A 

 

Protein sequence

MHELAITQNV VDTIVERIGA ARATAVHLVI GRVSGVVPDS VRFCFDLVAA GTPVEGARLE 
IDEPPGRARC RRCGATFEAD DRLLLVLCPC GSADVEVVGG DELMIVTVEV TPVPSGGGDV 
GCVEPAGVTT SRRRPG