Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1930 |
Symbol | |
ID | 3904292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2269043 |
End bp | 2270332 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637879267 |
Product | cytochrome P450 |
Protein accession | YP_481034 |
Protein GI | 86740634 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2124] Cytochrome P450 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.708059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGTCA CAACCGATTC CGTATTCGCC GGGGCGGACG CCGGTACCGG CGTCGCGGCC GACCACGGGA AACCGCTCCC GGACCAGGCG CCTGATCTGC TGGCCGCGTT GTTCGATCCC GCGAACAGGC CGAATCCCTA TCCGCTCTAT GCGCGCCTGC GGGCAGCCGG CCGGCTGCAC GAGACGCCGT TCGGACTGCG GGTCGCCACC CGGCACGACG ACTGTGTAGC GGTACTGTCC AACCAGAGCT GGGGGCACGA TCAGGAGGCC CACCAGCTGC ATCCCACCTT GCCCGCCGAG GAGTTCCCGG CGACGTTCCT GTGGATGGAG CCGCCGGACC ACACCCGGCT GCGCGGCCTG GTGAGTAAGG CGTTCACCCC GGGTCGGGTC GCCGATCTGC GGCCGCGTAT CACCGCCCTC GTCGACGATC TGCTCGACAC CGCGCTGCGG GCCGGAGAGT TCGACCTCAT CGAGACGATC GCGTACCCGC TGCCACTCAC GATCATTTGT GAGATCCTCG GGGTGCCGGC GGCCGACCAC GGCATCATCC AGATCTGGTC GCAGGCGTTG GCCAGGGCGT TCGACCCGGA CGTCCTGATG TCTCCGGAGG CGTTGGCGGA GCGTAACGAC GCCATCCCCG AGTTTCTCGC CTACTTCCGT GCGCTGGTCG CGCGCAGCCG CCGCAGCGGT GGCGACGATC TGCTCAGCGC GCTGGCTGCC GTCGAGGAGC AGGGTGATCG GCTGACCGAG GACGAACTGC TCGGCACCTG CGTGACCCTG CTGATTGCCG GCCACGAGAC GACGGTCAAC CTGGTCGGCA ACGGGGCGCT GGCGTTGCTG CGTAACCCCG ACCAGACGGC GTTGCTGCGC GACGAACCGG ATCTCATCCG GCCCGCCGTC GACGAGCTGC TACGCTATGA CTCCCCGATC CACCTCAACA CCCGGGCAGC GACCCGGGAG ATGACGGTGG GTGGCCGAAC CTTTTCCCCG GGTGAGGGTG TGGTGGCGTT GATCGCTTGC GCCAATCGTG ATCCGGAGGC ATTCGACGAC CCGGACCGTC TCGATGTGCG CCGCTACGTG GCAGGCTCCG GCGCGTCCCG GCACCTGTCG TTCAGCCTCG GTCACCACTA CTGCCTCGGC GCGCCGTTGG CGTTGCTCGA GATGGAGATC TTCCTGGCGG GGTTCCTCCA CCGGGTCCGG TCCGCCGAGC TTCTCGTCGA TTCGCCGCCC TACAAATCCA ACCTGCTCAT CCGAGGACTG GCGGAGCTCC CCGTCCGCTT CCGGGGATAG
|
Protein sequence | MAVTTDSVFA GADAGTGVAA DHGKPLPDQA PDLLAALFDP ANRPNPYPLY ARLRAAGRLH ETPFGLRVAT RHDDCVAVLS NQSWGHDQEA HQLHPTLPAE EFPATFLWME PPDHTRLRGL VSKAFTPGRV ADLRPRITAL VDDLLDTALR AGEFDLIETI AYPLPLTIIC EILGVPAADH GIIQIWSQAL ARAFDPDVLM SPEALAERND AIPEFLAYFR ALVARSRRSG GDDLLSALAA VEEQGDRLTE DELLGTCVTL LIAGHETTVN LVGNGALALL RNPDQTALLR DEPDLIRPAV DELLRYDSPI HLNTRAATRE MTVGGRTFSP GEGVVALIAC ANRDPEAFDD PDRLDVRRYV AGSGASRHLS FSLGHHYCLG APLALLEMEI FLAGFLHRVR SAELLVDSPP YKSNLLIRGL AELPVRFRG
|
| |