Gene Francci3_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1924 
Symbol 
ID3904286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2262412 
End bp2263227 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID637879261 
Producthypothetical protein 
Protein accessionYP_481028 
Protein GI86740628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.364642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCT CCGACACCAT CGAGAACGCG CACAGCTTTG ACGTATTCCA GCACTATGAG 
CGGCTGCAGT GGAAGCTGGT CGACCTGCCG CTGGACGAGA TCCGCAGGGA TCTTGTCCAG
CCCGAGTATA TTGCGCTGGT CAAGGGTGCG GTCATGGGTG AGGCCACCTC CATCGCGGCG
GTGCACGGCT TTCTCAACGA GTTCACCGAC GATTACGACT GCTCTGCCTT CGTGAACATC
TGGGGCTACC AGGAGCTCCA GCACCACTAC GCCTTCCGGG CGTGGCTGCA GGCGGTGGAC
GCCCAGATCG ACCAGCGCCG GATCGAGGCG TTGCGCGAGC CCTACGTGCC GGGCACCACG
CCGAGCGCCA CTTTGATCAC CAACGTCATC TCGGAGATGA CGGTGAACAC GGTCTACCGG
ACGATGTCGG AGTGGGTGCG CGAGCCGGTG CTGGCGGACC TCATGCTGCG CGCCAGCCGG
GACGAGGCCG GTCATGCCCG GGAGTTCATG TACTTCGCGA AGCGCCGGCT GGAGCGGAAT
CCGCACGAGC TCGTGTCCGT GTTGGAGACG TTCCACTTCT ACATGTCGAA CAACCGGATC
AAGCATCCGG TGGGGGAGTT CAAGCACCGC CTGCTCGAGG ATCTTCAGGG CCACGAGACC
ATTGACACCG CGTTCGAGGT GTTCTTGCGG GTTTCCGAGC CGGATACGCT GGAACAGCTC
CAAGTGAAGA TCCGCAAGGC GCTCGGCAGC GTTCTCGGCC GGGAGTTCAA CCGGAACTCC
GACATCCGGC AGGCGTTGGT GGAGGCGATG CCCTGA
 
Protein sequence
MATSDTIENA HSFDVFQHYE RLQWKLVDLP LDEIRRDLVQ PEYIALVKGA VMGEATSIAA 
VHGFLNEFTD DYDCSAFVNI WGYQELQHHY AFRAWLQAVD AQIDQRRIEA LREPYVPGTT
PSATLITNVI SEMTVNTVYR TMSEWVREPV LADLMLRASR DEAGHAREFM YFAKRRLERN
PHELVSVLET FHFYMSNNRI KHPVGEFKHR LLEDLQGHET IDTAFEVFLR VSEPDTLEQL
QVKIRKALGS VLGREFNRNS DIRQALVEAM P