Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1920 |
Symbol | |
ID | 3906869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2257111 |
End bp | 2257599 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637879258 |
Product | heat shock protein Hsp20 |
Protein accession | YP_481025 |
Protein GI | 86740625 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.143113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.422548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTC CGGTGCGAAG CAGCCAACGT CCGGCCCCGG TGATCAGGTG GGATCCGTTC CGGGAGATCG AGGACGCCTG GACCCGGATG GGAAGCCTGC TCGATGAGGT CGTCGGTGGC GCGGAAGGCC GACCGGTGGG ACTGCTGGCC GCCGCCGTCA TCCCGGTCGA CATCGAGGAG ACCGACGATG CCTACATCGT CGAACTCGAG CTCCCCGGGG TGCGCGGCCG CGATGTCTCG ATCGACCTGC AGGATAACGA GCTTCGGGTC ACCGGTGAGA TCAAGGAGCG GGAACGGAAG GGCGTGCTAC GCCGTCAGAC CCGCCGGGTG GGCAGGTTTG AACATCGCAT CGTGCTGCCG GGCGAGGTGG ACCCGGAGTC GGTCAGTGCG TCGCTGGACG ACGGGGTGCT GACGATCCGG CTCGCCAAGT CCAGGAAGAG TCAGCCCAGG CACATCGAGG TCACCGGCGG CAGTGGCGGC GGCAGCTGA
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Protein sequence | MAFPVRSSQR PAPVIRWDPF REIEDAWTRM GSLLDEVVGG AEGRPVGLLA AAVIPVDIEE TDDAYIVELE LPGVRGRDVS IDLQDNELRV TGEIKERERK GVLRRQTRRV GRFEHRIVLP GEVDPESVSA SLDDGVLTIR LAKSRKSQPR HIEVTGGSGG GS
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