Gene Francci3_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1920 
Symbol 
ID3906869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2257111 
End bp2257599 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content67% 
IMG OID637879258 
Productheat shock protein Hsp20 
Protein accessionYP_481025 
Protein GI86740625 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.143113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.422548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTC CGGTGCGAAG CAGCCAACGT CCGGCCCCGG TGATCAGGTG GGATCCGTTC 
CGGGAGATCG AGGACGCCTG GACCCGGATG GGAAGCCTGC TCGATGAGGT CGTCGGTGGC
GCGGAAGGCC GACCGGTGGG ACTGCTGGCC GCCGCCGTCA TCCCGGTCGA CATCGAGGAG
ACCGACGATG CCTACATCGT CGAACTCGAG CTCCCCGGGG TGCGCGGCCG CGATGTCTCG
ATCGACCTGC AGGATAACGA GCTTCGGGTC ACCGGTGAGA TCAAGGAGCG GGAACGGAAG
GGCGTGCTAC GCCGTCAGAC CCGCCGGGTG GGCAGGTTTG AACATCGCAT CGTGCTGCCG
GGCGAGGTGG ACCCGGAGTC GGTCAGTGCG TCGCTGGACG ACGGGGTGCT GACGATCCGG
CTCGCCAAGT CCAGGAAGAG TCAGCCCAGG CACATCGAGG TCACCGGCGG CAGTGGCGGC
GGCAGCTGA
 
Protein sequence
MAFPVRSSQR PAPVIRWDPF REIEDAWTRM GSLLDEVVGG AEGRPVGLLA AAVIPVDIEE 
TDDAYIVELE LPGVRGRDVS IDLQDNELRV TGEIKERERK GVLRRQTRRV GRFEHRIVLP
GEVDPESVSA SLDDGVLTIR LAKSRKSQPR HIEVTGGSGG GS