| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1917 |
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| Symbol | |
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| ID | 3906866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2251026 |
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| End bp | 2251979 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637879255 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_481022 |
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| Protein GI | 86740622 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000235972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.976548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTAA CGCATCCGAC CGAGACGCCG ACGAGCCTGA TGACCGGGCA TCCGGTTCGG
CTGGCCCGCC CGGGGGAGAC GGACGACCGC GAGTCGCGCC CCGCCCGGGA CACCACCACG
ACAATCACCC GAACCGGCAC CCCCGGCATC GGCGGCATCA CCGCCACCGG CCCCGGCCAC
CCCCTACCCA CCCCCCTGCT AGCCACCAAC CGCGTCGGCC AACACGTCCG CGTCCCCAAG
ACCGCCGAAC TCGTCGCCGC CCACCTACGC CGCCAGATCG TCCGCGGCGA ACTCCAAGAA
GGCGACGCCC TACCCCCCGA AGCCGTCCTC ATGGAACAGT TCGGCGTCTC CCGCCCCACC
CTGCGCGAAG CCTTCCGCGT CCTCGAATCC GAAGCCCTCA TCTCCGTCCG CCGCGGCGCC
CACGGCGGCG CCCGCGTCCA CACCCCCAAC GGCGACGTCG CCGCCCGCTA CACCGCCCTC
GTCCTCGAAC ACCGCCACAC CACCCTCGCC GACATCCACA CCGCCCACAC CCACCTCGAA
CCCACCGCCA TCCGCCTCCT CGCCACCACC GCCACCGACC ACACCCTGAC CACCCTCACC
GCCCACCTCA CCGCCACCGA CCACGCCCTG ACCACCCCCA CCCCCGACCC CACCGACATC
CACACCCGCC ACCTGCGCTT CCACACCCTG CTGCTCGACA CCACCACCAA CCACACCCTC
ACCATGATCA CCAGCATGCT CCGGCACATC CTCGACGCCA CCACCCCCGA CACCCCCACC
CCCATCCCCG ACCTGCCAAC CCTGCGCCAC CAGCACACCA CCCACCACCA GCTCCTCACC
CACCTCACCC AGCACGACCC CGACGCCGCC GAAACCCTCT GGCGCCACCA CCTCACCACC
ACCCCCCACA CCCCCCACCA ACCCACCACC CCCCTCGACC TCCTCGGCGA GTAG
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| Protein sequence | MTLTHPTETP TSLMTGHPVR LARPGETDDR ESRPARDTTT TITRTGTPGI GGITATGPGH
PLPTPLLATN RVGQHVRVPK TAELVAAHLR RQIVRGELQE GDALPPEAVL MEQFGVSRPT
LREAFRVLES EALISVRRGA HGGARVHTPN GDVAARYTAL VLEHRHTTLA DIHTAHTHLE
PTAIRLLATT ATDHTLTTLT AHLTATDHAL TTPTPDPTDI HTRHLRFHTL LLDTTTNHTL
TMITSMLRHI LDATTPDTPT PIPDLPTLRH QHTTHHQLLT HLTQHDPDAA ETLWRHHLTT
TPHTPHQPTT PLDLLGE
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