Gene Francci3_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1911 
Symbol 
ID3906860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2244427 
End bp2245821 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content72% 
IMG OID637879249 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_481016 
Protein GI86740616 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.462593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.780803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCT CGGTAATGAT TCCCCCGCGT ATTTCCCGTG GGTGGGGTCA CTCGGCCAGG 
CCGGAATCCC GGCCGGCGGA ATCGCCTGGT CGCCGGCCCC GGCGGTGGCC GGGGGGGACG
CTTCTGCTCG CCGCGGTGCT GTCCGCGGCG GCCTGTTCCG GCGGGGGGGC GTCACCGGCG
CCGGCCGGGG CCACCCCCGC CCCGGATCCG GCGGCGAGCG TGACGGTCAC GCCGAGGGAC
GGCGCTACCG GGGTGGCGCT GACCAGCCCG ATCGTCGTGC GCGGCAACGC CCCGCTGGCC
GCGGTCTCCG TCAACCGGGG GGCGAGCGCG TCGGAGAAGA CGGAGCCGGG GACAATGCCC
GGCACCTTCT CGGCCGATCA TCGGACCTGG ACATCCTCCG GCGGGCTGTT CGCCGACTCG
CGGTACGACG TCGAGGCGTC AACGTCCCCG GCGACGGGCA TCGCCGGGAC GACGTCGGTG
CGGACCAGCT TCGTGACCGG CGTCCCGGCG AAGTCGTTCA AGGTCTCCTG GGAGCCGGTC
GCGGGCCAGA CCGTCGGGAT CGGCGCGCCG ATCAGCCTGA CGTTCAGCGC CCCCGCGTCC
AGTCGGGCCG CCGTCCAGAG CCGGCTGGTC GTACGGACCG ATCCGCCGGT CCTCGGCGCG
TGGAACTGGC TGTCGAACCG GGTCGTCATG TGGCGACCGG AGGGGTACTG GAAGCCCGGG
ACGAAGGTGC ACGTCGAGGC TAACTTCGCC GGCTACGACG CGGGCGGGGG CCGGCTCGGG
GTCAAGGACC GGGCGATGGA CTTCGTCATC GGCTCCGCCC AGGTCTCCAA GGTCGACTCG
GCCACCCACA CGATGAAGGT CTTCCGGGAC GGGCAACTGC TGCGCACGAT GCCGGTCAGT
CTCGGCAGAC CCAGTCTGCC GAGCATGGAC GGCCCGCACA ACGTGCTGGG CAAGTCACCC
GAAGTGATCA TGGACTCGGC CACCGTGGGC ATCCCCCAGG GCAATCCGGA CTACTACTAC
GAGAAGGTCC AGTGGGCGGT CAACTACACC AGTGGCGGGC AGTACGTGCA TTCCGCCCCC
TGGTCGGTGC CCTCCCAGGG GCGAGCCAAC GTCTCCCACG GGTGCGTGAA CGCCTCACCC
GCCGACGCCC AGTGGTTCTA CAACTTCACC CGGCTCGGTG ACATCATCGA CATCGTCAAC
ACCGGTCGGC CGCCGGACAC CTCACAGCTC GGCAACGCGT GGTCGGTCCC CTGGGCCACG
TGGAAGGCGG GCAGCGCGCT GCCGGTGTCC GACCAGCTCG CCCCCGTGGT GAGCCTCGAC
TCCGCGGTGA GCACAGTCAC GCCCGGGCCC GTGACCGCCA CCCCCAGGAC CGGCGCGGCG
GGCGCCGGCG CCTGA
 
Protein sequence
MSRSVMIPPR ISRGWGHSAR PESRPAESPG RRPRRWPGGT LLLAAVLSAA ACSGGGASPA 
PAGATPAPDP AASVTVTPRD GATGVALTSP IVVRGNAPLA AVSVNRGASA SEKTEPGTMP
GTFSADHRTW TSSGGLFADS RYDVEASTSP ATGIAGTTSV RTSFVTGVPA KSFKVSWEPV
AGQTVGIGAP ISLTFSAPAS SRAAVQSRLV VRTDPPVLGA WNWLSNRVVM WRPEGYWKPG
TKVHVEANFA GYDAGGGRLG VKDRAMDFVI GSAQVSKVDS ATHTMKVFRD GQLLRTMPVS
LGRPSLPSMD GPHNVLGKSP EVIMDSATVG IPQGNPDYYY EKVQWAVNYT SGGQYVHSAP
WSVPSQGRAN VSHGCVNASP ADAQWFYNFT RLGDIIDIVN TGRPPDTSQL GNAWSVPWAT
WKAGSALPVS DQLAPVVSLD SAVSTVTPGP VTATPRTGAA GAGA