| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1888 |
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| Symbol | |
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| ID | 3906837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2219726 |
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| End bp | 2221009 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879226 |
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| Product | hydroxyglutarate oxidase |
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| Protein accession | YP_480993 |
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| Protein GI | 86740593 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.452346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAGGTC GCATCGCGGT GATCGGCGGT GGAATTCTCG GGCTGGCGGT CGCCCGTCGG
CTCGGGCAGG TCGAACCGGG ATCGGCCGTG ACGGTGTTCG AGAAGGAACA GGACATCGCC
CGGCATCAGA CCGGCCGCAA CAGCGGCGTC GTCCACGCCG GTCTCTACTA CGTCCCAGGT
TCGCTCAAAG CGATCCTGTG CCGCCGTGGG GTCGGGCTGC TGCGGGAGTT CTGCGCCACG
CACCGTATCC GGTACGACGA GTGCGGCAAG ATCGTGGTCG CCGTCGACAA CAGCGAGCTC
GAACGGTTGG CCGAGATCGA GAAGCGGGCG ACGGCGAACG GCGTACCGCG GACCCGGATG
CTCGACGCCG ACGAGCTGCG GTCCGTCGAA CCCCACGCCC GCGGGGTCGC CGCCCTGCAC
TCACCCACCA CCGCCATCGT CGACTATCCC GGGGTCGCGC GGGCCCTGCG TACCGAGATC
GTCGCCGCTG GCGGGGCCGT GCGCACCGGA GCCGAAGTGA TCGGGGTGGA GGATCGTCCA
GCCGGCGTCC ACCTTCGCCT CACGGTCGCC GGAACCGCGC GCGCGCGGCC CAACGGCAAT
CACGAGATGG CGTCCCGCAA CGGTGGCCGG GTCGCCGTCG TCTCCGAAAG CGTCGGGCCG
TTCGACCTGC TGATCTCCTG TGCCGGGCTG CAGTCGGATC TGGTGGCGAC ACTGACCGGC
GAGGACGCCT CCCCGCAGAT CGTTCCCTTC CGGGGCGACT ACTGGCTGCT GCGCCCCGAG
CGGCGTGGCC TCGTCCATGG GCTGATCTAT CCGGTTCCGG ATCCGCGATA TCCCTTCCTC
GGTATCCATC TCACCAAGCG CATCGACGGG GAGATCCTGG TCGGGCCGAA CGCGGTGCTG
GCCACTGCCC GAGAGGGGTA CACGGTCGGC ACCGTCCAGG GCGCTGACCT GCGACGGACG
CTCGCCTGGC CGGGGTTCCA CAAGATGGCG AAGACCCACT GGAAGACCGG CGCCAAGGAG
ATGCTGCGCA CGGCGAGCAA GCGGGCCTTC GTCGCCGAGG CCCGGCGCTA TGTCCCCGAG
CTGCGGGCCA CCGACGTGGT TCGTGGCCCC GCGGGAGTCC GGGCCCAGGC CGTCGCCCGC
GACGGTAGCC TCGTCGACGA CTTCGTCCTG TCCCACAACG GGCGGGTCGT GCATGTCCGT
AACGCGCCAT CTCCCGGCGC GACGGCGTCG TTGGCGATCG CTGAGCACAT CGTCAGCAAA
ATCGTTCCTG AACGGGCCAG CTGA
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| Protein sequence | MVGRIAVIGG GILGLAVARR LGQVEPGSAV TVFEKEQDIA RHQTGRNSGV VHAGLYYVPG
SLKAILCRRG VGLLREFCAT HRIRYDECGK IVVAVDNSEL ERLAEIEKRA TANGVPRTRM
LDADELRSVE PHARGVAALH SPTTAIVDYP GVARALRTEI VAAGGAVRTG AEVIGVEDRP
AGVHLRLTVA GTARARPNGN HEMASRNGGR VAVVSESVGP FDLLISCAGL QSDLVATLTG
EDASPQIVPF RGDYWLLRPE RRGLVHGLIY PVPDPRYPFL GIHLTKRIDG EILVGPNAVL
ATAREGYTVG TVQGADLRRT LAWPGFHKMA KTHWKTGAKE MLRTASKRAF VAEARRYVPE
LRATDVVRGP AGVRAQAVAR DGSLVDDFVL SHNGRVVHVR NAPSPGATAS LAIAEHIVSK
IVPERAS
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