Gene Francci3_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1883 
Symbol 
ID3906158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2215940 
End bp2216266 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content66% 
IMG OID637879221 
ProductDNA polymerase, beta-like region 
Protein accessionYP_480988 
Protein GI86740588 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.230497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGTCGT GGCTGCCTGG AGGCGATAAT GGCGAGGTGA CCGTCGACCT TCGTGACAGC 
CGGATCGCCG AGGTGTGCCG ACGCTACGGG GTCGCCGAGC TCTCCGTCTT CGGCTCGGTG
GCTCGTGGCG ACGACACCGA CTCCTCGGAC GTCGACCTGC TGTATGTGCT GGCGCCCGAC
TCGAAGCTTG GCTTCGAGAT CGTCGATCTT CGGGACGAGC TCGAAAAGAT CGTCGGTCGG
CACGTCGACC TGGTACCCAA GTCCCGGCTG AAGTGGGTCA TCCGCGACCG GGTACTCGCG
GAGGCTCGGG TCCTCTATGC GGCGTGA
 
Protein sequence
MRSWLPGGDN GEVTVDLRDS RIAEVCRRYG VAELSVFGSV ARGDDTDSSD VDLLYVLAPD 
SKLGFEIVDL RDELEKIVGR HVDLVPKSRL KWVIRDRVLA EARVLYAA