Gene Francci3_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1860 
Symbol 
ID3906135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2193488 
End bp2194867 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content64% 
IMG OID637879198 
Productcytochrome P450 
Protein accessionYP_480965 
Protein GI86740565 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCC AGGGGTCGGT CCGACGGTAT ATCAACGTCT ATCGAAATGA CAACGACATC 
AGAGGCCTGG AAAATCTCGA GACCCGCGTC GAGGAAAGTG ACGTGGTCTG GATAATACCT
GCAGTGGCGG GAGGTAGCAT TCGTCCGGCG GTCCAGGAGC CGAAGGTGCC AGAGGTTCTG
CCCTCGGAGT TCTTCCTCAA TCCTGGCCCA TCACCGCACG CGACGAACGC CGAGCTCAGA
TCGAAATGCC CCGTCCACCA GATTAACTAT CCTCCGGGAA GTGAGGCATA CGCCGTTCTC
GGCCACAGGG CCGTGGCGGA GGCCTTCACC GACTCGCGCC TGTCCAAGGA AGCGGAGAAC
CTACCTCCCA GGTTTCGCGA CAGGGCTCTG TCCAGCAGCC TCCTCATGGT GCGTAACCTG
GGATTCGCGG ACCCTCCCGA CCACGCCCGG CTGAGGAGGC CGATCAGCCG GGCATTTCTG
CCGAACGCGA TCGCCGACCT CCGCCCCCGC ATCCAGGATG TCGTCGACGA TCTCATCGAC
ACATTCCCCG CGCCCGGTGA GATCGACCTC CTCGGCGCGT TTGCCCTGCC GCTTCCACTC
ACTGTCATCT GCGAGTATCT CGGGATACCT GTCCAGGACA GACCACTCTT TCTCGAGTGG
GGTTACATTC TCAGCCAGGA TCCCTTCCAG CACGCGGAGT CCGAGCTGAA GGCCGCGACC
GAGGAATTCA CCGACTACTT CACCCGGCTG GTGGCCCGAC GCCGCACGGA TCTGCGGAAG
GACCTGCTCA GTGAGCTCGT AAGGGCGGCA GACAGTGACG CACTCAGTGA ACGCGAACTC
CTCTCCACCA TTCTCCTCCT GCTCATCGCG GGCCACAAGA CGGTCGCGAA CCTGATAGGA
AATGGGACTG CTCTGCTACT CGGCCACCCA GGCCAGCTCG ACCTGCTCCG AACCACTCCC
GAGCTGATTC CCGCCGCGGT CGAGGAGATG CTGCGCTTCG AGGGTTCGGC CGCCTGGGCA
TCCATGCGGG TCGCCGTCGA GGACATGCGG CTCGCCGGAA CAGAAATTCC CAGGGGGAGC
TTCGTGCATC TCTTGCTGTC CAGCGCGGGG CACGATCCGG AGGCATATGA CGAGCCGGAG
CGGTTCGACG TCACCCGATC CCCGAACCAC CATCTGGCTT TCGGCCACGG CGCGCACTTC
TGCGTTGGTG CCCCCCTCGG CCGGCTTCAA GGAGACATCG CCTTCACAAC GCTGCTGCGC
CGGTTGCCAG GATTCGAGCT GGCAGTCCGT CAGGACGAGG TGGAGTGGCT CGCCGACAGC
TCGCTCAGCC GGGGGCTCAG AGCGCTCCCC ATCCGGGTCC GGGAGCGGTT GCCGCGATGA
 
Protein sequence
MDGQGSVRRY INVYRNDNDI RGLENLETRV EESDVVWIIP AVAGGSIRPA VQEPKVPEVL 
PSEFFLNPGP SPHATNAELR SKCPVHQINY PPGSEAYAVL GHRAVAEAFT DSRLSKEAEN
LPPRFRDRAL SSSLLMVRNL GFADPPDHAR LRRPISRAFL PNAIADLRPR IQDVVDDLID
TFPAPGEIDL LGAFALPLPL TVICEYLGIP VQDRPLFLEW GYILSQDPFQ HAESELKAAT
EEFTDYFTRL VARRRTDLRK DLLSELVRAA DSDALSEREL LSTILLLLIA GHKTVANLIG
NGTALLLGHP GQLDLLRTTP ELIPAAVEEM LRFEGSAAWA SMRVAVEDMR LAGTEIPRGS
FVHLLLSSAG HDPEAYDEPE RFDVTRSPNH HLAFGHGAHF CVGAPLGRLQ GDIAFTTLLR
RLPGFELAVR QDEVEWLADS SLSRGLRALP IRVRERLPR