Gene Francci3_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1856 
Symbol 
ID3906131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2189415 
End bp2189939 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID637879194 
Productexcisionase/Xis, DNA-binding 
Protein accessionYP_480961 
Protein GI86740561 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAC CCACCCGACC CGAACCGCTC CACGACGAGA CGTACCTGCC AGGCGAGGAC 
ACCGGTGAGA TCATCGACTT CCTGGCCGCG CTTCGCGACC GCGGCCGGCA GACCGCCGAC
CCGCGACCTC GGCTCACCGG CCCGGACGGG CACAGCGTCG AGCTTCCCGA GCCGATGTTC
AATGTCCTTC TGCAGGTCGC CGCGGCGATG AAGGCGGGCC TAGCCGTCAC GGTGGCGCCG
CACCATCTGA CGATGTCCAC CCAGGAAGCC GCGGACCTGC TCCGTATCTC CCGCACCACC
CTGGTTCGGC TGCTGGAGAG CGGCGCCATC CCGTTCGAGA AGCCCAGCCG CCACCGCAAG
GTCCGCCTCG ACGACCTCCT GGAGTACCGC CGACGCCAAC GCCACGCCGC CGACCTCGCC
TTCGCCGACA TGGTCGCCGA TACCGAGCGT CTCGGCCTCT ACGACGTCAG CCCCGACGAG
ACCCGGGCGG CACTGAAAGC CGCACGCAAG AAGACCGAAG GCTGA
 
Protein sequence
MTSPTRPEPL HDETYLPGED TGEIIDFLAA LRDRGRQTAD PRPRLTGPDG HSVELPEPMF 
NVLLQVAAAM KAGLAVTVAP HHLTMSTQEA ADLLRISRTT LVRLLESGAI PFEKPSRHRK
VRLDDLLEYR RRQRHAADLA FADMVADTER LGLYDVSPDE TRAALKAARK KTEG