Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1856 |
Symbol | |
ID | 3906131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2189415 |
End bp | 2189939 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637879194 |
Product | excisionase/Xis, DNA-binding |
Protein accession | YP_480961 |
Protein GI | 86740561 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAC CCACCCGACC CGAACCGCTC CACGACGAGA CGTACCTGCC AGGCGAGGAC ACCGGTGAGA TCATCGACTT CCTGGCCGCG CTTCGCGACC GCGGCCGGCA GACCGCCGAC CCGCGACCTC GGCTCACCGG CCCGGACGGG CACAGCGTCG AGCTTCCCGA GCCGATGTTC AATGTCCTTC TGCAGGTCGC CGCGGCGATG AAGGCGGGCC TAGCCGTCAC GGTGGCGCCG CACCATCTGA CGATGTCCAC CCAGGAAGCC GCGGACCTGC TCCGTATCTC CCGCACCACC CTGGTTCGGC TGCTGGAGAG CGGCGCCATC CCGTTCGAGA AGCCCAGCCG CCACCGCAAG GTCCGCCTCG ACGACCTCCT GGAGTACCGC CGACGCCAAC GCCACGCCGC CGACCTCGCC TTCGCCGACA TGGTCGCCGA TACCGAGCGT CTCGGCCTCT ACGACGTCAG CCCCGACGAG ACCCGGGCGG CACTGAAAGC CGCACGCAAG AAGACCGAAG GCTGA
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Protein sequence | MTSPTRPEPL HDETYLPGED TGEIIDFLAA LRDRGRQTAD PRPRLTGPDG HSVELPEPMF NVLLQVAAAM KAGLAVTVAP HHLTMSTQEA ADLLRISRTT LVRLLESGAI PFEKPSRHRK VRLDDLLEYR RRQRHAADLA FADMVADTER LGLYDVSPDE TRAALKAARK KTEG
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