Gene Francci3_1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1844 
Symbol 
ID3906235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2179265 
End bp2179729 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content70% 
IMG OID637879182 
Productputative protein Ymh 
Protein accessionYP_480949 
Protein GI86740549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.11317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTC GGTACCCGAT GTGGCCGCCG GCGGTCGTCG AGGGGATCTG CGACGTCCTC 
GGCCGCACGG ACCGGCCGGG ACTCACCGGT AGAGAGATCG ACCGGCTGCT CGGCATGCTC
GGCATCGCCG ATGTCCAGCC GGGCGCCAGC AAACGGGACC GGCTGTGGGC CGCGCTGATG
AGCAAACAGC AAGCCAATCA GGCGAGCAAC TGCATCATCG GGTTAATCAC CGAGGCGATG
GCGCCCGGCC GCTACCTGGA GGACCCGGCC CGGTTCGAGG CTCTGCGCGA TGGTCTGGCC
GAACCTCTCG CTCTGGTCGG ATGCCGGGTC AGCGACGAGG GCAAGGTGGC GCGGGCGCGG
AGGGCGACCA CCCTGGATGA GGTGGCCGCG TTGGCGGGAC GGCTACGGAC CGAGCTCACC
CGCCGAGGTG TGCACCCGGA GGTCACCCGG TACTGCGAGG AGTAG
 
Protein sequence
MTTRYPMWPP AVVEGICDVL GRTDRPGLTG REIDRLLGML GIADVQPGAS KRDRLWAALM 
SKQQANQASN CIIGLITEAM APGRYLEDPA RFEALRDGLA EPLALVGCRV SDEGKVARAR
RATTLDEVAA LAGRLRTELT RRGVHPEVTR YCEE