Gene Francci3_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1827 
Symbol 
ID3906218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2164268 
End bp2165722 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content71% 
IMG OID637879165 
Producthypothetical protein 
Protein accessionYP_480932 
Protein GI86740532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGGT CCAGCCGGCG GGCGGAACAG GACGAGCTGC GGGCGCGGAT GCGCGCGGCC 
GGCATGTCCC ACGACGAAAT CGCCGTCGAG TTCGCCCGCC GCTACGGCTA CCGCCCCCGC
GCCGCGCACC GCCACGCGCA CGGCTGGTCC CAAGTACAAG CCGCCGGACA CATCAACAGC
CACGCCGCCC AGGTCGGCCT CGACCCCCGT GGCGCCGCCC CGATGGACGG CCCCCGCCTG
TCCGAGCTGG AGAACTGGCC GCTCCCCAAC AACCGCCGCC GGCCCACCCC CCAGCTCCTC
GCGCTGCTCG CCGAGGTCTA CGGCACCAAC ATCCACAACC TCATCGACCT CGACGACCGC
GAACACTTCA CTCCCGCCGA CACCCTCTTG ATCAGCCGCG TTGATCGCAT CGAGCCTGCC
GCTGGCCGCA TTCTGCCTGC GCCCCGGGCT GCTCCTTCCG CCCGGGGGCT CGTCCAGCCA
GGCTCTCCGG CCCACATCGA CCGACGCGAC TTCGTCACCG CGACGGCTAC CGCGCTCACG
TTCGGGAGAA CCGCCCCGCG GCACGTCGAC CCGGCGCTCG TCGACTACTT CGGCCAGCAG
CTGGAGGGCC ACTACCGAGC GGACGTGATG CTCGGTCCCC GCGAGCTGAT CAGTACCGTC
ACCGTTCAGC ACACGCTCAT CAGCAACCTG GTGGCGACCG CACGCGGGGA GACGCGGCTG
GCCCTCCTGC GCTCCAGCGC GGCCTATGCC TCGCTGATCG GCTGGCTCCA TCAGGATGCC
GGTGACCTTG AAACTTCGTC CGTCTGGCGG GGCGTCGCTT TGGAGGTCGC ACAACGCTCC
CGGGACCCGC AGCTCGTCGC CTACGCGCTG CTCAACCACG CATCAGTCCG CACAGATCTT
GCTGACGGGC TCGGCGCGCT CGACCTGTGT GGCGCGGTCC TGGCCGACGC CGGTCGACTC
AGCCCGAAGA TGCGGGTCCT GGCGCTCCAG CAGCAGGCCC ACGGCGCGTC ACTCGTCGGA
GACCGCGCCA CCGTCGACTC CGCCCTGGAC CAGGCGGCTC CGCTCGTCGA GAGATGCGAC
GACGGCCTGC CGTGGGGCAA CGCATGCCGT CGCACGTCGG CCTACCTGGA GGTGCAACGC
GCCACCTGCT ACGGACGCTT GGGCCTGGTT ACGGCCGCTG CCGGCCTGTG GCGGCAGATC
CTCGACACGA CGCCTGCCAA CGCCCGGCGA GACCGCGGTG TTTTTCTCGC CCGGCAGGCC
ACCGCGTGCG TCCAGAGCGG CGACGTCGGG CGCGCGGTCG ATGCCGGGCG ACTTGCGGCG
GCCCTGGCGG TGGAAACTGG GTCCGTGCGG ATTCGCCGCG AGCTCGCCGG CCTACGACAA
GCGGCGCAAC CCTTGAAAGG CGCGGCCGTC GGCCGCGACA TCGATGAGAT CTTCGCCCCG
GAGAAGGAGA CCTGA
 
Protein sequence
MSRSSRRAEQ DELRARMRAA GMSHDEIAVE FARRYGYRPR AAHRHAHGWS QVQAAGHINS 
HAAQVGLDPR GAAPMDGPRL SELENWPLPN NRRRPTPQLL ALLAEVYGTN IHNLIDLDDR
EHFTPADTLL ISRVDRIEPA AGRILPAPRA APSARGLVQP GSPAHIDRRD FVTATATALT
FGRTAPRHVD PALVDYFGQQ LEGHYRADVM LGPRELISTV TVQHTLISNL VATARGETRL
ALLRSSAAYA SLIGWLHQDA GDLETSSVWR GVALEVAQRS RDPQLVAYAL LNHASVRTDL
ADGLGALDLC GAVLADAGRL SPKMRVLALQ QQAHGASLVG DRATVDSALD QAAPLVERCD
DGLPWGNACR RTSAYLEVQR ATCYGRLGLV TAAAGLWRQI LDTTPANARR DRGVFLARQA
TACVQSGDVG RAVDAGRLAA ALAVETGSVR IRRELAGLRQ AAQPLKGAAV GRDIDEIFAP
EKET