Gene Francci3_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1810 
Symbol 
ID3906201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2145723 
End bp2147090 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content67% 
IMG OID637879148 
Productuncharacterized FAD-dependent dehydrogenase 
Protein accessionYP_480915 
Protein GI86740515 
COG category[R] General function prediction only 
COG ID[COG2509] Uncharacterized FAD-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGC GGGTTTTCCA TACCGTCGTG GTGGGTGCCG GCCCCGGGGG GTTGATTGCA 
GCCTACCGAT CTGATGTGCC CGCGCCGGGC CTTCTCCTCC TCGACGGAGG TGACGATGTG
GAGGAGCGGA TTGGCGCTCT GGGCTCCGAT AGCCGAGGGG ACGTGGTGAC CCGGGGGTTT
GGCGGTGCCG GGCTGTTCTC GGACGGCAAG CTGTGCTTGT CACCGCGGAT CGGGAGCACC
GTCAGCCACA GATTCGATCC TTCTCGCGTT TCCGCGCGGC AGCACGCGAT CGATGAGGTT
CTTCGCTCCG GCGAGCGGGC CGACCTGCAC GGCGGGGACG CCGAAGCCGC AGAAAATTTC
GAGAAACGCG CGAAGGTCGC CGGATTAGAA TATGTTCATT ATCCGGTCCG TCACGTCGGG
ACCGACCAGC TACCTCGGAT GCTCAGCCGG TTGCGGACGC GTCTGGCGGC GAGGGCGACG
GTCGCCTGCC GTACGACGTG TATCGGTATC CGCCCGTCAG GACGTTCCGA TTTCCGGTGG
GAGCTGGAGT TGGATGGTCC CGGGGTCAGG CGGGTCCACG CGGTCAACGT CGTCCTGGCC
CCGGGGAAGG TCGGCGCATC GTGGCTCGGG GACGTGGGTC GGGAGCTGGG CCTGGGCCGC
GACGACGCCC AACCGAAGAT CGGGTTCCGG TTGGAGGGAG CGAAGGAGTT CCTCGGACCG
CTGCTGGAGA TAGCCACCGA CCCGAAGGTC ATCTGGAGCG GGCCCGATGG GGTCGAGGTC
CGAACCCACT GCGTGTGCTA CGGCGGCGAC GTCGTCGCGG CCGACTATCA CGGGCTGACC
CTGGTAGGCG GGCATGCGAC CTCAGCGCAT GCCGAGAACC GCTCCAACAG CGCGATTATT
GCAACGGCCG GCCGGAGATT GCCCCTCACC GCTGACGATG CCCGCACGCT CGTGGCCGCG
ATCAACCGCC GCCACGGTGG GCTGATCGGC CAGCGGCTCG GCGCCTTCCT TCCGGACACG
CCTCTGCCCA CCAGCCAGGC GGTAGGCGAG TTTGTGCCGA GCCTGCCCGA TGCCGCGCCC
GGCGACTTCA CCGCCGAGTT CCCGACAGCG ATCGTGAGCG CGCTACAAAC ATTTCTTTTC
CGGCTCGCCT CCCTGTGTCC GGGGGTTCTG CACCCGGATA ACTTTCTCTA CGGGCCCGCG
GTGGAACGGT GGGCATCACG TTTCACGGTT ACCGACGAGA TGGAAGCCCC AGGCCAGCCG
GGACTGTATC TCGTGGGCGA CGGCCCCGGG CTCACCGGCG GCATCATCGG CGCGGCGGAA
ACAGGCTGGC TCGCGGGCGA CGCCATTACT GCGCAGGCGC GCCGTTAG
 
Protein sequence
MNARVFHTVV VGAGPGGLIA AYRSDVPAPG LLLLDGGDDV EERIGALGSD SRGDVVTRGF 
GGAGLFSDGK LCLSPRIGST VSHRFDPSRV SARQHAIDEV LRSGERADLH GGDAEAAENF
EKRAKVAGLE YVHYPVRHVG TDQLPRMLSR LRTRLAARAT VACRTTCIGI RPSGRSDFRW
ELELDGPGVR RVHAVNVVLA PGKVGASWLG DVGRELGLGR DDAQPKIGFR LEGAKEFLGP
LLEIATDPKV IWSGPDGVEV RTHCVCYGGD VVAADYHGLT LVGGHATSAH AENRSNSAII
ATAGRRLPLT ADDARTLVAA INRRHGGLIG QRLGAFLPDT PLPTSQAVGE FVPSLPDAAP
GDFTAEFPTA IVSALQTFLF RLASLCPGVL HPDNFLYGPA VERWASRFTV TDEMEAPGQP
GLYLVGDGPG LTGGIIGAAE TGWLAGDAIT AQARR