| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1787 |
|---|
| Symbol | |
|---|
| ID | 3904017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2124680 |
|---|
| End bp | 2125189 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637879125 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480892 |
|---|
| Protein GI | 86740492 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.234797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC ACACCTGGAC CCTGATCGAG GACATCACCG CCCGCGTGCA ACGCGCCGTC
CGCGCCGGCG ACCAGCCCGC GATCCTCGGA CTCCACGGCA CACGGAACCT GATCGTCAGC
GACTACGACT ACCTCTGCAG CTGGGCCACC GCCCTCGCCT TCGAGATCCG CGCCGCGGCC
CAGGCCCAGA GCAACGCCAC CCACCGGTGG GTCCTCGCCG TTCCCCAGGT CTGGTACGAC
GACGGCGAGA TCATCCAGGC CCGGCCGCTG CACACCGCAC CCGTCCAAGC CGACGAGCAG
GAGGCGATCA CCTGGATGAG CTGCGACGAC ACCGACGGCG TCGACTACGG CCGCGTCCCG
TTCACCCGCC GACCCAACGG CGAACCGGTC TTCGACGACC CCGAGTACTT CACCAGCCCC
GTCCACTCGC TCCAGCGCAC CCCCGGCGCC GCGCTGCACC GCCTTCTGAC CGCCAACATC
CCCGACCTCG CCTCCCATCT GCCGACGTGA
|
|---|
| Protein sequence | MNTHTWTLIE DITARVQRAV RAGDQPAILG LHGTRNLIVS DYDYLCSWAT ALAFEIRAAA
QAQSNATHRW VLAVPQVWYD DGEIIQARPL HTAPVQADEQ EAITWMSCDD TDGVDYGRVP
FTRRPNGEPV FDDPEYFTSP VHSLQRTPGA ALHRLLTANI PDLASHLPT
|
|---|
| |