| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1783 |
|---|
| Symbol | |
|---|
| ID | 3904013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2119175 |
|---|
| End bp | 2119948 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637879121 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_480888 |
|---|
| Protein GI | 86740488 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.138367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTAACCT ACCCTGGTGT CGTCGACCTG CCCGAGTCGA CCCTGACCTT CCTCGCGGGG
CTGCTGGCCG AGGACCGCGC CCAGCGTCGG ACCTGGCGCA AGCTGCCCCC ACCCGAGCAG
GCACTCCTGG TGCTCGTCCA CCTCCGCAAG GGTGAACGCT ACGAGCAGCT CGCCGAGGGC
TTCCAGGTCA GTGTCGGCAC CGTCCACAAC TACATCCGCG AAGCCGTCCG CCTGCTCGCC
ACTCACGGCC GGACCCTGCT CGCCGCGGTC TGGATCTTCG CGTGGACCCA GAGCAACTTC
CTCATCCTCG ACGGCACCGT CGTGCGTACC AACCGTGTCC GCGCGCACAA CAAGCTGTAC
TACTCGGGCA AGCACAAGTA CCACGGCATC AACCTGCAGG GCCTCACCGA CCCCTACGGC
CGGCTGATCT GGATCTCCGA AGGGCTTCCC GGCTCCGTCC ATGACCTCAC CGCGGCCCGG
ATGCACGACA TTCTCGATCT GATCGACCGC TCGGAGCTCT ACCTCTACGC GGACAAGGGC
TACGTCGGCG GCGAGGGCGA CCGCCTCCTC GTCCCGATCA AGAAACCCAA GAACAACGAC
CTCCCCGACC GTGACAAGGA GGCCAACCGG ACCCACGCCA CCACCCGCTC ACAAGGCGAA
CGAGGATTCG CGGTCCTCAA GAACTGGCAC ATATTCGACC GTTTCCGTGG CTGCCCACGC
CGCGTCGGCA CCTTCGCCCA GGCCGCCCTC GTCCTCGCCA CCGAGGGCCT TTAG
|
|---|
| Protein sequence | MLTYPGVVDL PESTLTFLAG LLAEDRAQRR TWRKLPPPEQ ALLVLVHLRK GERYEQLAEG
FQVSVGTVHN YIREAVRLLA THGRTLLAAV WIFAWTQSNF LILDGTVVRT NRVRAHNKLY
YSGKHKYHGI NLQGLTDPYG RLIWISEGLP GSVHDLTAAR MHDILDLIDR SELYLYADKG
YVGGEGDRLL VPIKKPKNND LPDRDKEANR THATTRSQGE RGFAVLKNWH IFDRFRGCPR
RVGTFAQAAL VLATEGL
|
|---|
| |