| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1778 |
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| Symbol | |
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| ID | 3904008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2115365 |
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| End bp | 2116117 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879116 |
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| Product | transposase |
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| Protein accession | YP_480883 |
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| Protein GI | 86740483 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3316] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.887632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.245657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACCC TGGCGGTCCG CTGGTACCTG CGGTTCGCCC TGTCGTACCG CGACGTGGCG
GAACTCCTCG CCGAACGCGG CCTCGAGATT GATCACGTCA CGGTCTACCG GTGGGTGCGC
CGGTTCACCC CGCTGCTGAT CGACGCGGCC CGGCCATGCC GGCACACACC GGATGATCGT
TGGTTCGTCG ACGAAACGTC GGTGAAGGTC GCCGGACGAT GGACCTGTCT GTACCGGGCC
GTCGACCAGG TCGGCCAGGT CATCGACGTG GTGGCCGGCG AGAAGCGGGA TCTCGCCGCG
GCCCGCCGGT TCTTTACCCG CGCCCTGTCC CACGGCCGGC GGCCCGTCGA GGTGACCACC
GACCGGGCCG CCTCCTCCCC ACGAGTCCTC GACGAACAGC TCCCTGCCGC TCCTCACATC
GACGACCAGT ACGCGAACAA TCCGATCGAG GCCGACCACG GCCGGATCAC GGCACGACTA
CAGCCGATGC GATCGCCGCG CGGGACGGAA CGGGTATCGC TGGTCAAGCT CGCTGGCGAT
CTCCAGGTGG ATCATCCCGT GGCCCGCAGG CCGCCGCGGA TGTCTTCCAT CACTGCTCAT
GGGACGGTCC GCAGGCCTGA TCCCCGCTTC CTTCTCTGGG CTGCGAGGTG CTGGCCAGAG
GTGACCGCCT CGGGTCGGCG GGGGTGCTGC CAGGGGTCCA GAGCGCGCAG CGCGTCCGCG
ACCCGCCGCA GGGTTTGCTG GTCGGTGCGG TAG
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| Protein sequence | MITLAVRWYL RFALSYRDVA ELLAERGLEI DHVTVYRWVR RFTPLLIDAA RPCRHTPDDR
WFVDETSVKV AGRWTCLYRA VDQVGQVIDV VAGEKRDLAA ARRFFTRALS HGRRPVEVTT
DRAASSPRVL DEQLPAAPHI DDQYANNPIE ADHGRITARL QPMRSPRGTE RVSLVKLAGD
LQVDHPVARR PPRMSSITAH GTVRRPDPRF LLWAARCWPE VTASGRRGCC QGSRARSASA
TRRRVCWSVR
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