Gene Francci3_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1771 
Symbol 
ID3904001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2106924 
End bp2107745 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content70% 
IMG OID637879109 
Producthypothetical protein 
Protein accessionYP_480876 
Protein GI86740476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.384061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGCCG CCCGCGCGAT CACCGACAGA GGCTACACCC CGAACCGTCG TTGGGTCGTC 
GAGCTGGCCG GGGGCCGTTC TGTCTTCGTC AAGCAGGCGG TCAATGAGGA GACAGGGGCC
TGGCTACGTA CCGAGCACGC GGTCTACTCC TCACTGGGTG GGTCGTTCCT GCCTGAATCG
CTAGGGTGGG ACGACGACGG CGCGACTCCG ATGCTGGTGC TGGAGAACCT CTCCGACGGC
GAGTGGCCGC CGCCGTGGAC TCCCGAGGCG ATCGAGGCAG TGCAGACAAG CCTGGCCGAG
CTGCACCGGG TGCCCGCCCC CGCCGACCTG CCGGCTATCG AGGCCAGCCC CTACTGCCAG
CAGGGCTGGC GGCTGGTCGC AGAAGACCCC GGCCCTTTCC TCTCGCTCGG CCTGTGCACG
CACGGCTGGC TGGACCGGGC GCTGCCTGCT CTGCTCGGCG CGGCCGACAG CCAGACGCTC
GCCGGGCGTT CCACCCTCCA TCTCGACGTA CGCAGCGACA ACGTCTTCCT ACGCAAAGGC
CGTGCGGTCC TGTTCGACTG GAACCACGCC GCCATCGGCA ATCCTGAGTT TGACATCGCG
TTTTGGCTGC CGAGCCTGCG TGCCGAGGGC GGTCCGCTAC CCGAGCGGGT CGTAGCCGAC
CTCGACCCGG CTATGGCCGC GCACGTGGCG GGTTTCTTCG CCGCGCGCGC AGGCCAGCCG
CCTATCCCCG ACGCACCGGG GGTCCGCGGC ATCCAGCTGG TTCAGCTACG CATCGCCCTG
CCCTGGGCCG CGCGTGTGCT GGGCCTGCCG GCTCTGACCT GA
 
Protein sequence
MVAARAITDR GYTPNRRWVV ELAGGRSVFV KQAVNEETGA WLRTEHAVYS SLGGSFLPES 
LGWDDDGATP MLVLENLSDG EWPPPWTPEA IEAVQTSLAE LHRVPAPADL PAIEASPYCQ
QGWRLVAEDP GPFLSLGLCT HGWLDRALPA LLGAADSQTL AGRSTLHLDV RSDNVFLRKG
RAVLFDWNHA AIGNPEFDIA FWLPSLRAEG GPLPERVVAD LDPAMAAHVA GFFAARAGQP
PIPDAPGVRG IQLVQLRIAL PWAARVLGLP ALT