| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1763 |
|---|
| Symbol | |
|---|
| ID | 3906829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 2095985 |
|---|
| End bp | 2097292 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637879101 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_480868 |
|---|
| Protein GI | 86740468 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5659] FOG: Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.24112 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGTGG GGTGGGGATC CGGGTCTGGT TGGCTGCTTG CTGTGACGCC GGAGGAGATG
GCGGTGGTGC GTCCGGTCGT GGAGGAGTTC GCGGCGCGGA TGTTCGTGGA TCTGCCGCGT
AGGGATCAGC GGGCCAAGGG TGAGCTGTAT CTGCGGGGGC TGCTGTTGGA CGGGAAGCGC
AAGAGCGTGC AGCCGATGGC GGAGCGCCTC GGGGTGGATC ATCAGCAGTT GCAGCAGTTG
CAGCAGTTCC TGCGGAACTC GACGTGGGAC TACGCCGAGG TTCGCGCCCG GCTGGCCGGC
TGGGCGGTCG GGTTCGTCCG CCCGGAGGCG CTGGTCATCG ATGACACGGG CTTCGTGAAG
GACGGGGCGG CGTCGCCTGG GGTGGCCCGG ATGTACTCGG GGACGTTGGG CAAGGTCGGG
AACTGTCAGA TCGGGGTGTC CGTGCACGCG GCGACGGACT GGGCGTCGGC GGCGCTGGAC
TGGCGGCTGT TCCTGCCTGC CAGCTGGGAC GACACCGGCC TCGACGACCC GGACGAGGCC
GCGGTGGTGC GTGCCCGCCG CGAGAAGGCA GGTGTTCCCG ACGGTGCGCG GCATCGGGAG
AAGTGGCGTC TGGCGCTGGA CATGCTCGAC GAGATCGCCG GCTGGGGTGT GCCCGCCCGG
CCGGTACTCG CCGACGCCGG CTACGGCGAC TGCGCGCAGT TCCGCCAGGG CCTGACCGAC
CGCGGCCTGG TCTACACGGT CGGGGTCACC CCGACCGCCA CCGCCCACCC GGGGGCCGCC
GAACCCGTGA CCGCGCCGTA CACGGGCAGC GGTCGCCCGC CGCTGCCTGC CTACCCGGAC
CCGCCGGCGA CCTTGAAAGC CCTGGTCCTG GCCGCCGGCC GCGGTGCGCT GCGGTGGGTG
ACCTGGCGGC GCGGCACCCA CAAGACCCCC GGCAACACGG CCGCGCTGAT GCGCTCCAGG
TTCCTGGCCC TGCGGGTCCG CCCCGCCGCC AAAGCCCTGA CCCGAGACGA TGACCGCAGC
CTGCCCGCCT GCTGGCTGCT CGCCGAATGG CCCCCTGGCA AGAACGAACC CACCGACTAC
TGGCTGTCCA CCCTGCCCCC GGACATCCCC CTGCGCCGAC TCGTCCGGCT CGCGAAGCTG
CGCTGGCGCG TCGAGCACGA CTACCGCGAA CTCAAAGACG GCCTCGGCCT GGACCACTAC
GAAGGCCGAT CCTTCGACGG CTGGCACCGC CACGTCACCC TCACCTGCCT CGCCCAAGCC
CTCTGCACCC AGCTGCGCCG CACCCCAAAA GCCCCTGCGC CGGCCTGA
|
|---|
| Protein sequence | MVVGWGSGSG WLLAVTPEEM AVVRPVVEEF AARMFVDLPR RDQRAKGELY LRGLLLDGKR
KSVQPMAERL GVDHQQLQQL QQFLRNSTWD YAEVRARLAG WAVGFVRPEA LVIDDTGFVK
DGAASPGVAR MYSGTLGKVG NCQIGVSVHA ATDWASAALD WRLFLPASWD DTGLDDPDEA
AVVRARREKA GVPDGARHRE KWRLALDMLD EIAGWGVPAR PVLADAGYGD CAQFRQGLTD
RGLVYTVGVT PTATAHPGAA EPVTAPYTGS GRPPLPAYPD PPATLKALVL AAGRGALRWV
TWRRGTHKTP GNTAALMRSR FLALRVRPAA KALTRDDDRS LPACWLLAEW PPGKNEPTDY
WLSTLPPDIP LRRLVRLAKL RWRVEHDYRE LKDGLGLDHY EGRSFDGWHR HVTLTCLAQA
LCTQLRRTPK APAPA
|
|---|
| |