| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1761 |
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| Symbol | |
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| ID | 3906827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2092227 |
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| End bp | 2094203 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637879099 |
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| Product | DNA topoisomerase II |
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| Protein accession | YP_480866 |
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| Protein GI | 86740466 |
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| COG category | [H] Coenzyme transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.271812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGGA TCGCTGCGCG ACCCGCGCGC GCCCCAGAAT ACACCGCGCG GTCCATCGTG
CTCTTCTCCG GGCTTACTGC GGTTCGGCGC AATCCGTCGA TGTACATCGG TTCGACCGGC
ACCGAGGGCC TGCACCACCT GGTCTTCGAA CTGATCGACA ACGCGGTCGA CGAGTTCGCG
GTGGGCACGT GCGGGCTGAT CGAGGTCGTG CTGCACGCCG ACGGTTCCTG CTCGGTAAGC
GATGACGGTC GGGGTATTCC GGTCGACGAA CACCCCGACC TCCGCGTCCC GGCGCTGCAG
GTCGTGATGA CGACCCTGCA CTCCGGCGGC AAGTTCCAGG GTGACACCTA CCGGCGCTCG
GCAGGCCTGC ACGGTGTCGG CCTGTCCTGT GTCAACGCGC TGTCGGAATG GCTGAGGGTC
GAGGTGCACC GCGATGGCGG CATGTACACC CAGAGCTATG GCCGGGGGGA ACCGACCACC
ACCGTGGACA TGGTGGGGAC CAGCGACAGG CACGGTACGC TGGTGCGTTT TCGTCCCGAT
ATGATGATCT TCGATGCTGC TGCCTTCGTG ACGGGCGTTC TCGCCGCCCG GATGGCTGAA
CTGGCGTTCC TGCACCCCGG GCTGGTGCTG CGGCTGGTGG ATGAGCGCAC AGACACCGAG
GAGACGTTCG ACTACGTCGA GGGCGTGAAG GGGTTCCTCA CCCAACGGAA TCGCGACGCA
GAGGTGGTGC ACCCGGAACC GATCATTATC ACCGCCGAGC GCAGCGATCT GGTGTTGGAC
GTTGCTCTCC AGTGGACCGA GGGGTACGCC GAGGAGATGT CCAGCTTCGT CAACGCCGTG
CGCACCGACC AGGGCGGCGC GCACGTCGAC GCGCTGCGCA CGGGTCTGGC CTCGGCGATC
AACGACCATG CCAGCATGAA TCGGATGCTC GACTCGTTCG CCGGCGAACG GATCACCACC
AACGACATCC TTGAGGGCCT GACTGCGGTG GTGTCGTTGC GGATGGACTC GCCCCGGTTC
GACGGCCAGA CCAAACGGCG GTTGCAGAGC CCGGAGGTCG GGCCGTTCGT GCGTAGGGCC
GTGGCCGAGA CCGTCGCGGC CACGTTGCGC CGCGAGCCGG GACTGGGCGC ACGCGTGGTG
GCCAGGGCGC TGGACGCCAC ACGTGCCAGG CTCGCCGCCC GCCTGGCCGG CAGGGCAGTA
CGCTACCAGC GGCGCAAGCT GGAGATCGAT TACGAGGTCT ACAGGCGACA GTTCGGCATC
CGGTCGCGCA ACTGGCACGA CTCCTGCTCG TGGCTCGCAG ACGAGGGCCT GCTCGCCGAG
CACGCCGCGC TGTGCGATGT GCCTGCGGAT GCGCGGATGC TCGACGTCTG TTGCGGCAGT
GGTGTCGTCG GCGACTCCTT CCGCGGCAAG GTCGGGGAGA TGATCGGCCT GGACATCACC
CCGGAGATGG TTGAACTCGC CTCCCAGCGA CTGGACCGGG TGGACCGGGG CACCGTGTAC
GACCTGCCGT ACCCGGACGC ATCCTTCGAC CTGGTCGTCA ACCGCGAAGT GCTACATCTG
CTACCGCAGC CCGAACTTCC GCTCGCTGAG ATCTACCGAG TACTACGGCC CGGTGGCCAG
TTCATCGTCG GCCAGATCAT GCCCTACGCC GATGAGGACG CCTACTGGAT GTTCCGCATA
TTCAAGAAGA AGCAACCGTT GCTCTTCCAG ATGTTCCGCG AACCAGAGTT CCGGTCCCTG
CTGCAGGGCG TGGGGTTCAT CGACCTGAAA ATGACCGAGT ACTTCCTGTG GGAGTCGATC
GACCTGTGGA TCGATACGCA TGAGACCACG CCCGCGCACA GGCAGGAGAT CTACCGGCTG
TACTACGACG CCCCGAGGGA GGTCCGGGCG GTCCACCCAT TCGAGGTCAG CCAGGACGGC
TCGGTACGCG ATCGGTGGCG CTGGTGCGTC TACTCGATGC GCAAACTCTT GCCGTGA
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| Protein sequence | MARIAARPAR APEYTARSIV LFSGLTAVRR NPSMYIGSTG TEGLHHLVFE LIDNAVDEFA
VGTCGLIEVV LHADGSCSVS DDGRGIPVDE HPDLRVPALQ VVMTTLHSGG KFQGDTYRRS
AGLHGVGLSC VNALSEWLRV EVHRDGGMYT QSYGRGEPTT TVDMVGTSDR HGTLVRFRPD
MMIFDAAAFV TGVLAARMAE LAFLHPGLVL RLVDERTDTE ETFDYVEGVK GFLTQRNRDA
EVVHPEPIII TAERSDLVLD VALQWTEGYA EEMSSFVNAV RTDQGGAHVD ALRTGLASAI
NDHASMNRML DSFAGERITT NDILEGLTAV VSLRMDSPRF DGQTKRRLQS PEVGPFVRRA
VAETVAATLR REPGLGARVV ARALDATRAR LAARLAGRAV RYQRRKLEID YEVYRRQFGI
RSRNWHDSCS WLADEGLLAE HAALCDVPAD ARMLDVCCGS GVVGDSFRGK VGEMIGLDIT
PEMVELASQR LDRVDRGTVY DLPYPDASFD LVVNREVLHL LPQPELPLAE IYRVLRPGGQ
FIVGQIMPYA DEDAYWMFRI FKKKQPLLFQ MFREPEFRSL LQGVGFIDLK MTEYFLWESI
DLWIDTHETT PAHRQEIYRL YYDAPREVRA VHPFEVSQDG SVRDRWRWCV YSMRKLLP
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